RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 PRRG2O14669 202 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 DSCR3O14972 297 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 MATN3O15232 486 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 NRDCO43847 1150 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 WFS1O76024 890 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 IPO7O95373 1038 aaKnown RBP8.69□□□□□ -1.02
NUP54-211ENST00000512151 CHRNB4P30926 498 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 PTGER1P34995 402 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 GALNT2Q10471 571 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 KIF5AQ12840 1032 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 MESDQ14696 234 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 DPYSL2Q16555 572 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 GPRC6AQ5T6X5 926 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 TXNRD3NBQ6F5E7 133 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 ARHGEF18Q6ZSZ5 1173 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 LAPTM4BQ86VI4 370 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 AMIGO1Q86WK6 493 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 PSTKQ8IV42 348 aaKnown RBP8.69□□□□□ -1.02
NUP54-211ENST00000512151 RHOT2Q8IXI1 618 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 GHDCQ8N2G8 530 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 MDS2Q8NDY4 140 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 DDHD1Q8NEL9 900 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 OR2L2Q8NH16 312 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 LZTFL1Q9NQ48 299 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 KLHL1Q9NR64 748 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 EURLQ9NYK6 297 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 STMN3Q9NZ72 180 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 C3orf18Q9UK00 162 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 NXT1Q9UKK6 140 aaKnown RBP8.69□□□□□ -1.02
NUP54-211ENST00000512151 PLCL2Q9UPR0 1127 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 ICKQ9UPZ9 632 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 HYOU1Q9Y4L1 999 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 CAPN6Q9Y6Q1 641 aa8.69□□□□□ -1.02
NUP54-211ENST00000512151 IGHV1-45A0A0A0MS14 117 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 A0A1W2PQ72 361 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 MACROD2A1Z1Q3 448 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 GRID2IPA4D2P6 1211 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 LCE2BO14633 110 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 TTI1O43156 1089 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 PROSCO94903 275 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 TPBGLP0DKB5 382 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 PYGMP11217 842 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 FDXRP22570 491 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 PEBP1P30086 187 aaKnown RBP8.68□□□□□ -1.02
NUP54-211ENST00000512151 ZNF135P52742 658 aaPredicted RBP8.68□□□□□ -1.02
NUP54-211ENST00000512151 TAS2R40P59535 323 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 ZNF33BQ06732 778 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 PRKG2Q13237 762 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 ABHD17BQ5VST6 288 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 CNSTQ6PJW8 725 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 FAM151BQ6UXP7 276 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 CD163Q86VB7 1156 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 CNTD1Q8N815 330 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 STT3BQ8TCJ2 826 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 HSPH1Q92598 858 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 DLG3Q92796 817 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.68□□□□□ -1.02
NUP54-211ENST00000512151 RBM41Q96IZ5 413 aaKnown RBP8.68□□□□□ -1.02
NUP54-211ENST00000512151 VPS50Q96JG6 964 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 HGH1Q9BTY7 390 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 ADGRE3Q9BY15 652 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 PCDH18Q9HCL0 1135 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 LUC7LQ9NQ29 371 aaKnown RBP8.68□□□□□ -1.02
NUP54-211ENST00000512151 CUTCQ9NTM9 273 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 IP6K2Q9UHH9 426 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 GUCA1BQ9UMX6 200 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 HEBP2Q9Y5Z4 205 aa8.68□□□□□ -1.02
NUP54-211ENST00000512151 DNAJC13O75165 2243 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 A0A0J9YY10 115 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 FAM171A2A8MVW0 826 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 H7C1Q1 480 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 MYO1FO00160 1098 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 MAN1A2O60476 641 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 RAF1P04049 648 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 UQCRHP07919 91 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 ZGLP1P0C6A0 271 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 PIM1P11309 404 aaPredicted RBP8.67□□□□□ -1.02
NUP54-211ENST00000512151 COMTP21964 271 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 ARL4AP40617 200 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 CARSP49589 748 aaKnown RBP8.67□□□□□ -1.02
NUP54-211ENST00000512151 EFNA3P52797 238 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 TUBA3CQ13748 450 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 PIGHQ14442 188 aaPredicted RBP8.67□□□□□ -1.02
NUP54-211ENST00000512151 NOMO1Q15155 1222 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 LDLRAP1Q5SW96 308 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 FCRLBQ6BAA4 426 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 TUBA3EQ6PEY2 450 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 NAPRTQ6XQN6 538 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 UNC5AQ6ZN44 842 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 NLRP9Q7RTR0 991 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.67□□□□□ -1.02
NUP54-211ENST00000512151 NT5DC3Q86UY8 548 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 MCATQ8IVS2 390 aaKnown RBP8.67□□□□□ -1.02
NUP54-211ENST00000512151 CFAP206Q8IYR0 622 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 BEST3Q8N1M1 668 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 CPSF7Q8N684 471 aaKnown RBP8.67□□□□□ -1.02
NUP54-211ENST00000512151 NIPA2Q8N8Q9 360 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 LRRC57Q8N9N7 239 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 MYRIPQ8NFW9 859 aa8.67□□□□□ -1.02
NUP54-211ENST00000512151 FAM57AQ8TBR7 257 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms