RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 ELOVL4Q9GZR5 314 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATP13A3Q9H7F0 1226 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TIMMDC1Q9NPL8 285 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 INTS7Q9NVH2 962 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CMTM6Q9NX76 183 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPP1R14DQ9NXH3 145 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PLEK2Q9NYT0 353 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 AHSPQ9NZD4 102 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ADA2Q9NZK5 511 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GALPQ9UBC7 116 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ADAM30Q9UKF2 790 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MYRFQ9Y2G1 1151 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RPH3AQ9Y2J0 694 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 WBP11Q9Y2W2 641 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MTO1Q9Y2Z2 717 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCDHGA11Q9Y5H2 935 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RNF215Q9Y6U7 377 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 DMBT1Q9UGM3 2413 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ANKHD1Q8IWZ3 2542 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MDFIC2A0A1B0GVS7 189 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 A0A1W2PQ45 241 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 A0A1W2PQY0 241 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 KCNU1A8MYU2 1149 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 KPNA7A9QM74 516 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 E5RI56 91 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 STX16-NPEPL1H3BU86 382 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 STX16O14662 325 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARPC2O15144 300 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 LRRTM2O43300 516 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 HOXA2O43364 376 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TLX3O43711 291 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PDE5AO76074 875 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PDE9AO76083 593 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 LALBAP00709 142 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GIMD1P0DJR0 217 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MLNP12872 115 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF44P15621 663 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 XRCC1P18887 633 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 UGT1A1P22309 533 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 S100A1P23297 94 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TNFSF9P41273 254 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CENPAP49450 140 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC26A2P50443 739 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 HK2P52789 917 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 HSD17B7P56937 341 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC26A5P58743 744 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 B4GALNT1Q00973 533 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC34A1Q06495 639 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 LRRC74AQ0VAA2 488 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GALNT1Q10472 559 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PDIA2Q13087 525 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MTM1Q13496 603 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAPGEF1Q13905 1077 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PTGES3Q15185 160 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAPRE1Q15691 268 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 MOGQ16653 247 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SOWAHAQ2M3V2 549 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 HKDC1Q2TB90 917 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRIM16LQ309B1 348 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPM1LQ5SGD2 360 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF618Q5T7W0 954 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLX4IPQ5VYV7 408 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 C1orf94Q6P1W5 598 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TTLL10Q6ZVT0 673 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CXXC5Q7LFL8 322 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 KDELC2Q7Z4H8 507 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 DNAJB7Q7Z6W7 309 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TAF8Q7Z7C8 310 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC9B2Q86UD5 537 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC36Q8IYA8 594 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CPXCR1Q8N123 301 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF786Q8N393 782 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RIBC1Q8N443 379 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 DTX3Q8N9I9 347 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RELL2Q8NC24 303 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ICA1LQ8NDH6 482 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMIEQ8NEW7 156 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 BHLHE22Q8NFJ8 381 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 LYPD6BQ8NI32 183 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GIPC3Q8TF64 312 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF583Q96ND8 569 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 BTBD9Q96Q07 612 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPP1R16BQ96T49 567 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TEAD3Q99594 435 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CGREF1Q99674 301 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZCCHC2Q9C0B9 1178 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CEP44Q9C0F1 390 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 IPPKQ9H8X2 491 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 CDHR5Q9HBB8 845 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SMURF1Q9HCE7 757 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SMOXQ9NWM0 555 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SEPT9Q9UHD8 586 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 BAIAP2Q9UQB8 552 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 RUVBL1Q9Y265 456 aaKnown RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPR45Q9Y5Y3 372 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 BACE2Q9Y5Z0 518 aa1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPIN1Q9Y657 262 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-211ENST00000512009 TRBV5-4A0A0C4DH59 114 aa1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM196BA6NMK8 535 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms