RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 CDC14AQ9UNH5 594 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 COMMD10Q9Y6G5 202 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 RELNP78509 3460 aa13.04□□□□□ -0.32
CCHCR1-227ENST00000508852 ESPL1Q14674 2120 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 TXNDC9O14530 226 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 HCRTR1O43613 425 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 MATN4O95460 622 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 CATP04040 527 aaKnown RBP13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 ERVK-10P10266 1014 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 PKMP14618 531 aaKnown RBP13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 CHRM3P20309 590 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 MGAT1P26572 445 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 GRIA3P42263 894 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 MAGEA6P43360 314 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 OCA2Q04671 838 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 PRAMEF13Q5VWM6 474 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 FCRL6Q6DN72 434 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 PPP1R32Q7Z5V6 425 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 OR9A1PQ8NGU1 263 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 LKAAEAR1Q8TD35 194 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 CALML6Q8TD86 181 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 SMPDL3AQ92484 453 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 LPGAT1Q92604 370 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 MVB12AQ96EY5 273 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 BIRC8Q96P09 236 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 ILKAPQ9H0C8 392 aaPredicted RBP13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 CCDC68Q9H2F9 335 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 XAB2Q9HCS7 855 aaKnown RBP13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 MAP10Q9P2G4 905 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 CDC23Q9UJX2 597 aa13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 USP9YO00507 2555 aaPredicted RBP13.03□□□□□ -0.32
CCHCR1-227ENST00000508852 FAM237BA0A1B0GVD1 139 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 HYKKA2RU49 373 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 SDR42E2A6NKP2 422 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 UMODP07911 640 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 GNLYP22749 145 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 ITGA3P26006 1051 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 FMO4P31512 558 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 AP2B1P63010 937 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 CRADDP78560 199 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 RELAQ04206 551 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 THOC5Q13769 683 aaKnown RBP13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 NKG7Q16617 165 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 MUM1Q2TAK8 710 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 WASHC2DQ5SRD0 308 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 FAM69BQ5VUD6 431 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 AGAP7PQ5VUJ5 663 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 NEPROQ6NW34 567 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 CASC4Q6P4E1 433 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 MICALCLQ6ZW33 695 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 RNF44Q7L0R7 432 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 PRUNE1Q86TP1 453 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 TAX1BP1Q86VP1 789 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 LRRC8AQ8IWT6 810 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 C2orf73Q8N5S3 287 aaPredicted RBP13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 FBXO15Q8NCQ5 510 aaPredicted RBP13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 MCUQ8NE86 351 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 OR2L3Q8NG85 312 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 SSC4DQ8WTU2 575 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 MFSD3Q96ES6 412 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 PBKQ96KB5 322 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 AGAP4Q96P64 663 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 IL17FQ96PD4 163 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 EBNA1BP2Q99848 306 aaKnown RBP13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 ZFYVE21Q9BQ24 234 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 MFRPQ9BY79 579 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 ZNF552Q9H707 407 aaPredicted RBP13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 ZNF304Q9HCX3 659 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 AGPAT4Q9NRZ5 378 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 SYBUQ9NX95 663 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 JRKLQ9Y4A0 524 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 SHANK1Q9Y566 2161 aa13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 SPENQ96T58 3664 aaKnown RBP13.02□□□□□ -0.33
CCHCR1-227ENST00000508852 USP9XQ93008 2570 aaPredicted RBP13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 BLACEA4D250 179 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 ERGP11308 486 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 ENO3P13929 434 aaPredicted RBP13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 FDXRP22570 491 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 RPA3P35244 121 aaPredicted RBP13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 KCNJ1P48048 391 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 VSX2P58304 361 aaPredicted RBP13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 ABATP80404 500 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 GPS1Q13098 491 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 ELOAQ14241 798 aaKnown RBP13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 GBX1Q14549 363 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 KCNJ11Q14654 390 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 SLC9A5Q14940 896 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 RBBP7Q16576 425 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 TUBB8Q3ZCM7 444 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 CTSL3PQ5NE16 218 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 GARNL3Q5VVW2 1013 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 LRRC8EQ6NSJ5 796 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 CNSTQ6PJW8 725 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 CILP2Q8IUL8 1156 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 Q8NA96 180 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 OR2A1Q8NGT9 310 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 PPP4R1Q8TF05 950 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 GRK7Q8WTQ7 553 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 MIPEPQ99797 713 aa13.01□□□□□ -0.33
CCHCR1-227ENST00000508852 EPS8L2Q9H6S3 715 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms