RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 A0A1B0GTL3 188 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 BBIP1A8MTZ0 92 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 MEI4A8MW99 385 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 E9PBE3 544 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 FOXE1O00358 373 aaPredicted RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 LSM1O15116 133 aaKnown RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 KLHL41O60662 606 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 JUNP05412 331 aaKnown RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 C1GALT1C1LP0DN25 315 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 ESRRAP11474 423 aaPredicted RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 TDGF1P13385 188 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 NPPBP16860 134 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 XRCC1P18887 633 aaPredicted RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 TSPAN8P19075 237 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 NCF2P19878 526 aaPredicted RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 MAPK1P28482 360 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 PTPN4P29074 926 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 PRDX3P30048 256 aaKnown RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 CNR2P34972 360 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 ARL1P40616 181 aaPredicted RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 ACTR1BP42025 376 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 PIK3CBP42338 1070 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 SCTRP47872 440 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 AFF3P51826 1226 aaKnown RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 FOXA1P55317 472 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 ACTR1AP61163 376 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 NCALDP61601 193 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 PHEXP78562 749 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 RELAQ04206 551 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 EMX2Q04743 252 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 ACTN3Q08043 901 aaPredicted RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 KLF10Q13118 480 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 CHIT1Q13231 466 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 ELOCQ15369 112 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 ZRSR2Q15696 482 aaKnown RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 HIST2H2ACQ16777 129 aaPredicted RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 C18orf21Q32NC0 220 aaPredicted RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 COQ5Q5HYK3 327 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 TJAP1Q5JTD0 557 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 PRAMEF14Q5SWL7 426 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 PRAMEF13Q5VWM6 474 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 NXNQ6DKJ4 435 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 HIST2H2AA3Q6FI13 130 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 ASRGL1Q7L266 308 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 RABEPKQ7Z6M1 372 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 LONP2Q86WA8 852 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 C17orf64Q86WR6 236 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 LAS2Q8IYD9 372 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 PHACTR4Q8IZ21 702 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 SLC22A18ASQ8N1D0 253 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 ABHD11Q8NFV4 315 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 TTLQ8NG68 377 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 SLC5A11Q8WWX8 675 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 ESAMQ96AP7 390 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 TUBGCP3Q96CW5 907 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 MED8Q96G25 268 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 OR4K3Q96R72 315 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 MYOCQ99972 504 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 SARGQ9BW04 601 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 ELOVL6Q9H5J4 265 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 AKTIPQ9H8T0 292 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 MRPL40Q9NQ50 206 aaKnown RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 AASDHPPTQ9NRN7 309 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 SIRT5Q9NXA8 310 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 NOP53Q9NZM5 478 aaKnown RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 ZIM2Q9NZV7 527 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 SUSD2Q9UGT4 822 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 MOSPD1Q9UJG1 213 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 CCL27Q9Y4X3 112 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 ENTPD2Q9Y5L3 495 aa8.78□□□□□ -1
NR1I3-216ENST00000502848 COPG1Q9Y678 874 aaKnown RBP8.78□□□□□ -1
NR1I3-216ENST00000502848 TLR4O00206 839 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 LAMTOR5O43504 91 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 DCNP07585 359 aaKnown RBP8.77□□□□□ -1.01
NR1I3-216ENST00000502848 T-ENOLP0DO92 83 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 RPL10P27635 214 aaKnown RBP8.77□□□□□ -1.01
NR1I3-216ENST00000502848 ARFIP1P53367 373 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 CORO7P57737 925 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 NXPH1P58417 271 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 HNRNPKP61978 463 aaKnown RBP eCLIP8.77□□□□□ -1.01
NR1I3-216ENST00000502848 EIF2B5Q13144 721 aaKnown RBP8.77□□□□□ -1.01
NR1I3-216ENST00000502848 STX5Q13190 355 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 DOC2AQ14183 400 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 KRT33BQ14525 404 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 KIR2DS3Q14952 304 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 TEAD4Q15561 434 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 ZNF528Q3MIS6 628 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 CCSMST1Q4G0I0 132 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 DNAL1Q4LDG9 190 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 PDCD4Q53EL6 469 aaKnown RBP8.77□□□□□ -1.01
NR1I3-216ENST00000502848 FBXO48Q5FWF7 155 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 XKR6Q5GH73 641 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 TMEM31Q5JXX7 168 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 C6orf136Q5SQH8 315 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 TPRG1LQ5T0D9 272 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 PEAR1Q5VY43 1037 aaPredicted RBP8.77□□□□□ -1.01
NR1I3-216ENST00000502848 MED27Q6P2C8 311 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 IYDQ6PHW0 289 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 IL27RAQ6UWB1 636 aa8.77□□□□□ -1.01
NR1I3-216ENST00000502848 BMP8AQ7Z5Y6 402 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms