RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 DANCRP0C864 163 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 BCL3P20749 454 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 RILPL1Q5EBL4 403 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 XKR3Q5GH77 459 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 SLC25A53Q5H9E4 307 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 ELFN2Q5R3F8 820 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 C20orf194Q5TEA3 1177 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 TMEM173Q86WV6 379 aaPredicted RBP3.01□□□□□ -1.93
SMC4-227ENST00000497984 NPEPL1Q8NDH3 523 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 OR52N5Q8NH56 324 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 PHLDA1Q8WV24 401 aaPredicted RBP3.01□□□□□ -1.93
SMC4-227ENST00000497984 ATL1Q8WXF7 558 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 JAKMIP2Q96AA8 810 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 SLC22A18Q96BI1 424 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 DHX58Q96C10 678 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 ZNF486Q96H40 463 aaPredicted RBP3.01□□□□□ -1.93
SMC4-227ENST00000497984 C10orf90Q96M02 699 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 CDRT15Q96T59 188 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 BARD1Q99728 777 aaKnown RBP3.01□□□□□ -1.93
SMC4-227ENST00000497984 POLR3GLQ9BT43 218 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 MIS12Q9H081 205 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 CPVLQ9H3G5 476 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 EQTNQ9NQ60 294 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 SERINC1Q9NRX5 453 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 TEX10Q9NXF1 929 aaPredicted RBP3.01□□□□□ -1.93
SMC4-227ENST00000497984 DPP3Q9NY33 737 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 B3GAT1Q9P2W7 334 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 CLIP2Q9UDT6 1046 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 ADD3Q9UEY8 706 aaKnown RBP3.01□□□□□ -1.93
SMC4-227ENST00000497984 IL17BQ9UHF5 180 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 CELA1Q9UNI1 258 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 TNNQ9UQP3 1299 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 PPP2R2CQ9Y2T4 447 aa3.01□□□□□ -1.93
SMC4-227ENST00000497984 PTRH2Q9Y3E5 179 aaKnown RBP3.01□□□□□ -1.93
SMC4-227ENST00000497984 COL4A4P53420 1690 aaPredicted RBP3.01□□□□□ -1.93
SMC4-227ENST00000497984 RSF1Q96T23 1441 aaPredicted RBP3.01□□□□□ -1.93
SMC4-227ENST00000497984 COL16A1Q07092 1604 aaPredicted RBP3.01□□□□□ -1.93
SMC4-227ENST00000497984 A0A1W2PR80 420 aa3□□□□□ -1.93
SMC4-227ENST00000497984 hCG_1807616A0A1W2PRN6 198 aa3□□□□□ -1.93
SMC4-227ENST00000497984 TMEM221A6NGB7 291 aa3□□□□□ -1.93
SMC4-227ENST00000497984 ENTPD3O75355 529 aa3□□□□□ -1.93
SMC4-227ENST00000497984 ZWINTO95229 277 aa3□□□□□ -1.93
SMC4-227ENST00000497984 HPRP00739 348 aa3□□□□□ -1.93
SMC4-227ENST00000497984 PORP16435 677 aaPredicted RBP3□□□□□ -1.93
SMC4-227ENST00000497984 GABRA5P31644 462 aa3□□□□□ -1.93
SMC4-227ENST00000497984 CASP2P42575 452 aa3□□□□□ -1.93
SMC4-227ENST00000497984 MAZP56270 477 aaKnown RBP3□□□□□ -1.93
SMC4-227ENST00000497984 SQLEQ14534 574 aa3□□□□□ -1.93
SMC4-227ENST00000497984 TEX38Q6PEX7 206 aa3□□□□□ -1.93
SMC4-227ENST00000497984 SLC34A3Q8N130 599 aa3□□□□□ -1.93
SMC4-227ENST00000497984 FBXO39Q8N4B4 442 aa3□□□□□ -1.93
SMC4-227ENST00000497984 NUP37Q8NFH4 326 aa3□□□□□ -1.93
SMC4-227ENST00000497984 LRRC15Q8TF66 581 aa3□□□□□ -1.93
SMC4-227ENST00000497984 SLAMF9Q96A28 289 aa3□□□□□ -1.93
SMC4-227ENST00000497984 SPACA9Q96E40 222 aaPredicted RBP3□□□□□ -1.93
SMC4-227ENST00000497984 SLC45A3Q96JT2 553 aa3□□□□□ -1.93
SMC4-227ENST00000497984 AGAP4Q96P64 663 aa3□□□□□ -1.93
SMC4-227ENST00000497984 MAF1Q9H063 256 aa3□□□□□ -1.93
SMC4-227ENST00000497984 S1PR5Q9H228 398 aa3□□□□□ -1.93
SMC4-227ENST00000497984 CCDC68Q9H2F9 335 aa3□□□□□ -1.93
SMC4-227ENST00000497984 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3□□□□□ -1.93
SMC4-227ENST00000497984 GDE1Q9NZC3 331 aa3□□□□□ -1.93
SMC4-227ENST00000497984 MRPL15Q9P015 296 aaKnown RBP3□□□□□ -1.93
SMC4-227ENST00000497984 ZHX1Q9UKY1 873 aaPredicted RBP3□□□□□ -1.93
SMC4-227ENST00000497984 FEZF1A0PJY2 475 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 ANKRD61A6NGH8 418 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 ASB14A6NK59 587 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 SHISA7A6NL88 538 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 TOMM70O94826 608 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 SEC24AO95486 1093 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 VTNP04004 478 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 EIF2DP41214 584 aaKnown RBP2.99□□□□□ -1.93
SMC4-227ENST00000497984 ALDH3A2P51648 485 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 TPD52P55327 224 aaPredicted RBP2.99□□□□□ -1.93
SMC4-227ENST00000497984 MAT1AQ00266 395 aaKnown RBP2.99□□□□□ -1.93
SMC4-227ENST00000497984 STK4Q13043 487 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 ODF4Q2M2E3 257 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 ITPRIPL2Q3MIP1 535 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 CBWD6Q4V339 395 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 IGSF11Q5DX21 431 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 CBWD3Q5JTY5 395 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 TMEM211Q6ICI0 200 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 TMEM207Q6UWW9 146 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 KIF6Q6ZMV9 814 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 CATSPERDQ86XM0 798 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 LINC00346Q8IVM7 164 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 CFAP206Q8IYR0 622 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 ARHGAP24Q8N264 748 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 ABHD12Q8N2K0 398 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 TSPAN14Q8NG11 270 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 C11orf45Q8TAV5 145 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 PDLIM5Q96HC4 596 aaKnown RBP2.99□□□□□ -1.93
SMC4-227ENST00000497984 C1orf147Q96MC9 270 aaPredicted RBP2.99□□□□□ -1.93
SMC4-227ENST00000497984 RAD9AQ99638 391 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 NUP85Q9BW27 656 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 PANK2Q9BZ23 570 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 SHARPINQ9H0F6 387 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 MED20Q9H944 212 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 GKN1Q9NS71 199 aa2.99□□□□□ -1.93
SMC4-227ENST00000497984 NDE1Q9NXR1 346 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms