RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 FBF1Q8TES7 1133 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 CCDC138Q96M89 665 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 TRIM54Q9BYV2 358 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 CHRNA10Q9GZZ6 450 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 PARVBQ9HBI1 364 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 ADAMTS6Q9UKP5 1117 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 PLCL2Q9UPR0 1127 aa15.34■□□□□ 0.05
LIME1-209ENST00000494776 EIF4E1BA6NMX2 242 aaKnown RBP15.33■□□□□ 0.04
LIME1-209ENST00000494776 PRICKLE3O43900 615 aaPredicted RBP15.33■□□□□ 0.04
LIME1-209ENST00000494776 OR2B3O76000 313 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 KLK3P07288 261 aaPredicted RBP15.33■□□□□ 0.04
LIME1-209ENST00000494776 ERGP11308 486 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 PHBP35232 272 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 DLSTP36957 453 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 GP5P40197 560 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 GRIA3P42263 894 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 NAA25Q14CX7 972 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 KBTBD12Q3ZCT8 623 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 ZC3H12BQ5HYM0 836 aaKnown RBP15.33■□□□□ 0.04
LIME1-209ENST00000494776 PRAMEF17Q5VTA0 474 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 DNAJC22Q8N4W6 341 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 NKAPQ8N5F7 415 aaKnown RBP15.33■□□□□ 0.04
LIME1-209ENST00000494776 OR2A1Q8NGT9 310 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 ZNF480Q8WV37 535 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 ZUFSPQ96AP4 578 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 TSPAN17Q96FV3 270 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 FMO2Q99518 471 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 SLC12A9Q9BXP2 914 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 ACTR5Q9H9F9 607 aaPredicted RBP15.33■□□□□ 0.04
LIME1-209ENST00000494776 MRPS30Q9NP92 439 aaKnown RBP15.33■□□□□ 0.04
LIME1-209ENST00000494776 LHX9Q9NQ69 397 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 TAC3Q9UHF0 121 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 CROTQ9UKG9 612 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 PDE10AQ9Y233 779 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 PCDHB3Q9Y5E6 796 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 PCDHGA4Q9Y5G9 962 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 LAMA5O15230 3695 aa15.33■□□□□ 0.04
LIME1-209ENST00000494776 A0A1W2PPV9 198 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 TARM1B6A8C7 271 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 E7ENX8 843 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 ZNF749O43361 778 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 KATNA1O75449 491 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 CCNDBP1O95273 360 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 HBQ1P09105 142 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 TCN2P20062 427 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 SPRP35270 261 aaPredicted RBP15.32■□□□□ 0.04
LIME1-209ENST00000494776 TAS2R39P59534 338 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 POU4F1Q01851 419 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 TAP2Q03519 686 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 ZNF460Q14592 562 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 USP10Q14694 798 aaKnown RBP15.32■□□□□ 0.04
LIME1-209ENST00000494776 GRTP1Q5TC63 336 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 MCATQ8IVS2 390 aaKnown RBP15.32■□□□□ 0.04
LIME1-209ENST00000494776 DLG3Q92796 817 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 MR1Q95460 341 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 ALKBH8Q96BT7 664 aaKnown RBP15.32■□□□□ 0.04
LIME1-209ENST00000494776 RBBP8Q99708 897 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 SPRTNQ9H040 489 aaPredicted RBP15.32■□□□□ 0.04
LIME1-209ENST00000494776 GPAMQ9HCL2 828 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 ARL15Q9NXU5 204 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 UTP6Q9NYH9 597 aaKnown RBP15.32■□□□□ 0.04
LIME1-209ENST00000494776 EURLQ9NYK6 297 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 MTO1Q9Y2Z2 717 aaKnown RBP15.32■□□□□ 0.04
LIME1-209ENST00000494776 AP1M2Q9Y6Q5 423 aa15.32■□□□□ 0.04
LIME1-209ENST00000494776 ZNF891A8MT65 544 aaPredicted RBP15.31■□□□□ 0.04
LIME1-209ENST00000494776 TSPAN12O95859 305 aa15.31■□□□□ 0.04
LIME1-209ENST00000494776 RHOXF2BP0C7M4 288 aa15.31■□□□□ 0.04
LIME1-209ENST00000494776 ZNF37AP17032 561 aaPredicted RBP15.31■□□□□ 0.04
LIME1-209ENST00000494776 WT1P19544 449 aaPredicted RBP15.31■□□□□ 0.04
LIME1-209ENST00000494776 IMPA1P29218 277 aa15.31■□□□□ 0.04
LIME1-209ENST00000494776 NAB1Q13506 487 aa15.31■□□□□ 0.04
LIME1-209ENST00000494776 FCRL6Q6DN72 434 aa15.31■□□□□ 0.04
LIME1-209ENST00000494776 TLDC1Q6P9B6 456 aa15.31■□□□□ 0.04
LIME1-209ENST00000494776 FAM199XQ6PEV8 388 aaPredicted RBP15.31■□□□□ 0.04
LIME1-209ENST00000494776 IFT20Q8IY31 132 aa15.31■□□□□ 0.04
LIME1-209ENST00000494776 SNRNP27Q8WVK2 155 aaKnown RBP15.31■□□□□ 0.04
LIME1-209ENST00000494776 MRRFQ96E11 262 aaKnown RBP15.31■□□□□ 0.04
LIME1-209ENST00000494776 MED8Q96G25 268 aa15.31■□□□□ 0.04
LIME1-209ENST00000494776 PDLIM5Q96HC4 596 aaKnown RBP15.31■□□□□ 0.04
LIME1-209ENST00000494776 RHOXF2Q9BQY4 288 aa15.31■□□□□ 0.04
LIME1-209ENST00000494776 DPH7Q9BTV6 452 aa15.31■□□□□ 0.04
LIME1-209ENST00000494776 CAB39LQ9H9S4 337 aa15.31■□□□□ 0.04
LIME1-209ENST00000494776 POPDC3Q9HBV1 291 aa15.31■□□□□ 0.04
LIME1-209ENST00000494776 CCDC177Q9NQR7 707 aaPredicted RBP15.31■□□□□ 0.04
LIME1-209ENST00000494776 STOX2Q9P2F5 926 aaPredicted RBP15.31■□□□□ 0.04
LIME1-209ENST00000494776 IL17BQ9UHF5 180 aa15.31■□□□□ 0.04
LIME1-209ENST00000494776 KCND3Q9UK17 655 aa15.31■□□□□ 0.04
LIME1-209ENST00000494776 MEN1O00255 615 aa15.3■□□□□ 0.04
LIME1-209ENST00000494776 ZSCAN9O15535 394 aaPredicted RBP15.3■□□□□ 0.04
LIME1-209ENST00000494776 HCRTR1O43613 425 aa15.3■□□□□ 0.04
LIME1-209ENST00000494776 ENO2P09104 434 aaPredicted RBP15.3■□□□□ 0.04
LIME1-209ENST00000494776 STMN1P16949 149 aa15.3■□□□□ 0.04
LIME1-209ENST00000494776 AGXTP21549 392 aa15.3■□□□□ 0.04
LIME1-209ENST00000494776 GABRA4P48169 554 aa15.3■□□□□ 0.04
LIME1-209ENST00000494776 AP1S2P56377 157 aa15.3■□□□□ 0.04
LIME1-209ENST00000494776 RPS15P62841 145 aaKnown RBP15.3■□□□□ 0.04
LIME1-209ENST00000494776 MC1RQ01726 317 aa15.3■□□□□ 0.04
LIME1-209ENST00000494776 RHDQ02161 417 aa15.3■□□□□ 0.04
LIME1-209ENST00000494776 PRDX1Q06830 199 aaKnown RBP15.3■□□□□ 0.04
LIME1-209ENST00000494776 GPS2Q13227 327 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms