RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 MED19A0JLT2 244 aaPredicted RBP3.42□□□□□ -1.86
SMC4-223ENST00000493695 ZWINTO95229 277 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 ABCB1P08183 1280 aaPredicted RBP3.42□□□□□ -1.86
SMC4-223ENST00000493695 KRTAP1-4P0C5Y4 121 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 PPP5CP53041 499 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 ALCAMQ13740 583 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 KRT33BQ14525 404 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 C9orf152Q5JTZ5 239 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 FIGLAQ6QHK4 219 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 TMCO3Q6UWJ1 677 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 RBPMS2Q6ZRY4 209 aaKnown RBP3.42□□□□□ -1.86
SMC4-223ENST00000493695 PLPPR4Q7Z2D5 763 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 MAML2Q8IZL2 1156 aaPredicted RBP3.42□□□□□ -1.86
SMC4-223ENST00000493695 POM121L12Q8N7R1 296 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 KCTD6Q8NC69 237 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 MCUQ8NE86 351 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 TSPAN14Q8NG11 270 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 OR5AP2Q8NGF4 316 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 EXD1Q8NHP7 514 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 SLCO2A1Q92959 643 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 ZNF830Q96NB3 372 aaPredicted RBP3.42□□□□□ -1.86
SMC4-223ENST00000493695 KRT12Q99456 494 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 OLFM1Q99784 485 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 BTBD10Q9BSF8 475 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 WWTR1Q9GZV5 400 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 ANKZF1Q9H8Y5 726 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 NPAP1Q9NZP6 1156 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 C5AR2Q9P296 337 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 PPIEQ9UNP9 301 aaKnown RBP3.42□□□□□ -1.86
SMC4-223ENST00000493695 RPS6KL1Q9Y6S9 549 aa3.42□□□□□ -1.86
SMC4-223ENST00000493695 PRSS51A0A1B0GVH4 220 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 A0A1W2PPM1 405 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 ELOVL7A1L3X0 281 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 ANKUB1A6NFN9 424 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 A8MXE2 369 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 TBX10O75333 385 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 PRKRAO75569 313 aaKnown RBP3.41□□□□□ -1.86
SMC4-223ENST00000493695 BCL10O95999 233 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 HPRP00739 348 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 FYNP06241 537 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 EFNA1P20827 205 aaPredicted RBP3.41□□□□□ -1.86
SMC4-223ENST00000493695 CCR3P51677 355 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 CDH13P55290 713 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 PAX9P55771 341 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 PAX8Q06710 450 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 AIMP1Q12904 312 aaKnown RBP3.41□□□□□ -1.86
SMC4-223ENST00000493695 NFATC2Q13469 925 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 RASA2Q15283 850 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 HIGD2BQ4VC39 106 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 TMEM211Q6ICI0 200 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
SMC4-223ENST00000493695 CEP57L1Q8IYX8 460 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 TC2NQ8N9U0 490 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 Q8NBF4 154 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 XXYLT1Q8NBI6 393 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 OR2AJ1Q8NGZ0 328 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 MIPOL1Q8TD10 442 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 DYRK2Q92630 601 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 SPACA9Q96E40 222 aaPredicted RBP3.41□□□□□ -1.86
SMC4-223ENST00000493695 LRRC3BQ96PB8 259 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 MS4A10Q96PG2 267 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 ABHD6Q9BV23 337 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 CCDC106Q9BWC9 280 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 PITPNM3Q9BZ71 974 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 ARRDC1-AS1Q9H2J1 176 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 EQTNQ9NQ60 294 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 ZNF701Q9NV72 531 aaPredicted RBP3.41□□□□□ -1.86
SMC4-223ENST00000493695 PRMT7Q9NVM4 692 aaPredicted RBP3.41□□□□□ -1.86
SMC4-223ENST00000493695 HAO2Q9NYQ3 351 aa3.41□□□□□ -1.86
SMC4-223ENST00000493695 IGHV3OR16-10A0A075B7F0 116 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 LOC101059948A0A1B0GTJ6 334 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 SPRY1O43609 319 aaPredicted RBP3.4□□□□□ -1.87
SMC4-223ENST00000493695 KHDRBS3O75525 346 aaKnown RBP3.4□□□□□ -1.87
SMC4-223ENST00000493695 PSMD10O75832 226 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 LINGO3P0C6S8 592 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 KRT20P35900 424 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 HNRNPKP61978 463 aaKnown RBP eCLIP3.4□□□□□ -1.87
SMC4-223ENST00000493695 SNAPC1Q16533 368 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 TCP11X2Q5H9J9 407 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 RNASEH2BQ5TBB1 312 aaKnown RBP3.4□□□□□ -1.87
SMC4-223ENST00000493695 FBXO39Q8N4B4 442 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 AFAP1Q8N556 730 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 CPSF7Q8N684 471 aaKnown RBP3.4□□□□□ -1.87
SMC4-223ENST00000493695 CCDC191Q8NCU4 936 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 SMAP2Q8WU79 429 aaPredicted RBP3.4□□□□□ -1.87
SMC4-223ENST00000493695 PTERQ96BW5 349 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 FAM81BQ96LP2 452 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 CFAP57Q96MR6 1250 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 WNT5BQ9H1J7 359 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 DPAGT1Q9H3H5 408 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 ABCB10Q9NRK6 738 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 TEX10Q9NXF1 929 aaPredicted RBP3.4□□□□□ -1.87
SMC4-223ENST00000493695 NFKBIL1Q9UBC1 381 aaPredicted RBP3.4□□□□□ -1.87
SMC4-223ENST00000493695 DDX25Q9UHL0 483 aaKnown RBP3.4□□□□□ -1.87
SMC4-223ENST00000493695 OSGIN1Q9UJX0 560 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 CCL27Q9Y4X3 112 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 KAT6BQ8WYB5 2073 aa3.4□□□□□ -1.87
SMC4-223ENST00000493695 A0A1W2PPQ1 181 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 TRBC2A0A5B9 178 aa3.39□□□□□ -1.87
SMC4-223ENST00000493695 PTGESO14684 152 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms