RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 BIRC8Q96P09 236 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 TUBB1Q9H4B7 451 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 TNFRSF10AO00220 468 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 PLOD2O00469 737 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 VPS4BO75351 444 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 IDO1P14902 403 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 TTPAP49638 278 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 FOXM1Q08050 763 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 LCP2Q13094 533 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 CAPRIN1Q14444 709 aaKnown RBP22.15■■□□□ 1.14
USF3-203ENST00000491165 NLRP8Q86W28 1048 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 MFSD2AQ8NA29 543 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 VPS35Q96QK1 796 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 ACTR3BQ9P1U1 418 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 EGFL7Q9UHF1 273 aa22.15■■□□□ 1.14
USF3-203ENST00000491165 SPEGQ15772 3267 aa22.14■■□□□ 1.14
USF3-203ENST00000491165 UBA6A0AVT1 1052 aaPredicted RBP22.14■■□□□ 1.13
USF3-203ENST00000491165 SUPT3HB4E1H0 165 aa22.14■■□□□ 1.13
USF3-203ENST00000491165 KERAO60938 352 aa22.14■■□□□ 1.13
USF3-203ENST00000491165 SUPT3HO75486 399 aa22.14■■□□□ 1.13
USF3-203ENST00000491165 LINC00032P0C843 101 aa22.14■■□□□ 1.13
USF3-203ENST00000491165 SLC6A2P23975 617 aa22.14■■□□□ 1.13
USF3-203ENST00000491165 PLOD1Q02809 727 aaPredicted RBP22.14■■□□□ 1.13
USF3-203ENST00000491165 RPL6Q02878 288 aaKnown RBP22.14■■□□□ 1.13
USF3-203ENST00000491165 CLCQ05315 142 aa22.14■■□□□ 1.13
USF3-203ENST00000491165 SPATS1Q496A3 300 aa22.14■■□□□ 1.13
USF3-203ENST00000491165 HEATR4Q86WZ0 1026 aa22.14■■□□□ 1.13
USF3-203ENST00000491165 FAM47BQ8NA70 645 aa22.14■■□□□ 1.13
USF3-203ENST00000491165 STAG3L4Q8TBR4 150 aa22.14■■□□□ 1.13
USF3-203ENST00000491165 LRRC58Q96CX6 371 aa22.14■■□□□ 1.13
USF3-203ENST00000491165 SYTL2Q9HCH5 934 aa22.14■■□□□ 1.13
USF3-203ENST00000491165 AGPAT4Q9NRZ5 378 aa22.14■■□□□ 1.13
USF3-203ENST00000491165 CMTM6Q9NX76 183 aa22.14■■□□□ 1.13
USF3-203ENST00000491165 BTRCQ9Y297 605 aa22.14■■□□□ 1.13
USF3-203ENST00000491165 C9JVG2 144 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 SLC25A14O95258 325 aaPredicted RBP22.13■■□□□ 1.13
USF3-203ENST00000491165 EEF1DP29692 281 aaKnown RBP22.13■■□□□ 1.13
USF3-203ENST00000491165 TRIM23P36406 574 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 USP39Q53GS9 565 aaKnown RBP22.13■■□□□ 1.13
USF3-203ENST00000491165 CTSL3PQ5NE16 218 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 FBXO39Q8N4B4 442 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 CBR4Q8N4T8 237 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 KIAA1191Q96A73 305 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 SLC45A3Q96JT2 553 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 BMFQ96LC9 184 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 INTS10Q9NVR2 710 aaKnown RBP22.13■■□□□ 1.13
USF3-203ENST00000491165 RNF112Q9ULX5 631 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 MED16Q9Y2X0 877 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 KNL1Q8NG31 2342 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 IGLV3-16A0A075B6K0 115 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 CRCPO75575 148 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 FASP25445 335 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 CDK9P50750 372 aaKnown RBP22.13■■□□□ 1.13
USF3-203ENST00000491165 CDK3Q00526 305 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 BLOC1S3Q6QNY0 202 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 TMEFF1Q8IYR6 380 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 TMEM145Q8NBT3 493 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 DDHD1Q8NEL9 900 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 DERL2Q9GZP9 239 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 P2RY12Q9H244 342 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 PCYT1BQ9Y5K3 369 aaPredicted RBP22.13■■□□□ 1.13
USF3-203ENST00000491165 ZNF318Q5VUA4 2279 aa22.13■■□□□ 1.13
USF3-203ENST00000491165 CUL9Q8IWT3 2517 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 CCDC163A0A0D9SF12 145 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 IQCF5A8MTL0 148 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 NDUFS2O75306 463 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 NDUFS3O75489 264 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 RHOBTB1O94844 696 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 BMP10O95393 424 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 HNRNPA2B1P22626 353 aaKnown RBP22.12■■□□□ 1.13
USF3-203ENST00000491165 MAOBP27338 520 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 FMO4P31512 558 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 CCR5P51681 352 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 KCTD21Q4G0X4 260 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 AARS2Q5JTZ9 985 aaKnown RBP22.12■■□□□ 1.13
USF3-203ENST00000491165 CERS6Q6ZMG9 384 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 EPHX4Q8IUS5 362 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 FAM81AQ8TBF8 368 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 ASB12Q8WXK4 309 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 SNX19Q92543 992 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 TMIGD2Q96BF3 282 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 COX14Q96I36 57 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 TRIM54Q9BYV2 358 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 ZDHHC3Q9NYG2 299 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 SPAG17Q6Q759 2223 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 ARPC2O15144 300 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 TPRG1LQ5T0D9 272 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 GCNT7Q6ZNI0 430 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 LPCAT2Q7L5N7 544 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 DET1Q7L5Y6 550 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 DRAXINQ8NBI3 349 aaPredicted RBP22.12■■□□□ 1.13
USF3-203ENST00000491165 TSPEARQ8WU66 669 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 SPACA7Q96KW9 195 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 COPS8Q99627 209 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 C9orf16Q9BUW7 83 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 SEMA4BQ9NPR2 832 aaPredicted RBP22.12■■□□□ 1.13
USF3-203ENST00000491165 TAS2R13Q9NYV9 303 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 PCDHA9Q9Y5H5 950 aa22.12■■□□□ 1.13
USF3-203ENST00000491165 GPR45Q9Y5Y3 372 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms