RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 C18orf21Q32NC0 220 aaPredicted RBP18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 CCDC58Q4VC31 144 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 PRR23CQ6ZRP0 262 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 SLC46A3Q7Z3Q1 461 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 GOLGA7Q7Z5G4 137 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 KRTCAP2Q8N6L1 136 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 GLB1L3Q8NCI6 653 aaPredicted RBP18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 DEPDC7Q96QD5 511 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 OR52E6Q96RD3 313 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 RNF167Q9H6Y7 350 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 KRT84Q9NSB2 600 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 ADPRHL2Q9NX46 363 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 TRMT6Q9UJA5 497 aaKnown RBP18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 A0A096LPI6 279 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 CENPXA8MT69 81 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 C21orf33P30042 268 aaPredicted RBP18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 DNAJA1P31689 397 aaKnown RBP18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 IL2P60568 153 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 TBCEQ15813 527 aaPredicted RBP18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 SOWAHCQ53LP3 525 aaPredicted RBP18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 SPANXN2Q5MJ10 180 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 NXNL2Q5VZ03 156 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 ELMO1Q92556 727 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 CPPED1Q9BRF8 314 aaPredicted RBP18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 KIF17Q9P2E2 1029 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 PCDH10Q9P2E7 1040 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 RIMKLBQ9ULI2 386 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 FRMPD3Q5JV73 1810 aa18.85■□□□□ 0.61
SNAPC3-206ENST00000490969 PNMA8CA0A1B0GUJ8 204 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 PER2O15055 1255 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 MYCLP1P12525 358 aaPredicted RBP18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 FPR1P21462 350 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 ENTHD1Q8IYW4 607 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 LIX1Q8N485 282 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 PITX2Q99697 317 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 TMEM246Q9BRR3 403 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 IL1RAPQ9NPH3 570 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 EIF3FO00303 357 aaPredicted RBP18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 MUSKO15146 869 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 B4GALT3O60512 393 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 DIRAS1O95057 198 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 DNTTP04053 509 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 ETV6P41212 452 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 MAGEA11P43364 429 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 RPP38P78345 283 aaKnown RBP18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 ELP6Q0PNE2 266 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 DDR2Q16832 855 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 ALFQ53S48 1182 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 GALNT12Q8IXK2 581 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 SIMC1Q8NDZ2 872 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 HASPINQ8TF76 798 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 ST6GAL2Q96JF0 529 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 SDHCQ99643 169 aaPredicted RBP18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 RTP3Q9BQQ7 232 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 CLMPQ9H6B4 373 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 NLE1Q9NVX2 485 aaPredicted RBP18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 ZMYM5Q9UJ78 669 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 SAMD4AQ9UPU9 718 aaKnown RBP18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 ANGPTL3Q9Y5C1 460 aa18.84■□□□□ 0.61
SNAPC3-206ENST00000490969 AP3D1O14617 1153 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 THP07101 528 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 PKMP14618 531 aaKnown RBP18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 RHOQP17081 205 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 CDKN1CP49918 316 aaPredicted RBP18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 CSNK2BP67870 215 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 GTF2H2Q13888 395 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 ZCCHC8Q6NZY4 707 aaKnown RBP18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 GTF2H2CQ6P1K8 395 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 AFTPHQ6ULP2 937 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 P3H2Q8IVL5 708 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 ATG16L2Q8NAA4 619 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 CD200R1Q8TD46 325 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 C1orf74Q96LT6 269 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 Q96MT0 163 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 POLR1EQ9GZS1 481 aaKnown RBP18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 ZFP14Q9HCL3 533 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 STARD7Q9NQZ5 370 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 C14orf119Q9NWQ9 140 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 NUDT4Q9NZJ9 180 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 BOLA1Q9Y3E2 137 aa18.83■□□□□ 0.61
SNAPC3-206ENST00000490969 LOC110117498-PIK3R3F6TDL0 507 aa18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 hCG_2039718K7EN88 272 aa18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 SLC15A1P46059 708 aa18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 ZNF140P52738 457 aaPredicted RBP18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 TSPY1Q01534 308 aa18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 BCL7AQ4VC05 210 aa18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 MRPL10Q7Z7H8 261 aaKnown RBP18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 LINC01599Q8WXQ3 324 aa18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 PIK3R3Q92569 461 aa18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 DMRTB1Q96MA1 342 aa18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 ZYG11BQ9C0D3 744 aa18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 OR51E2Q9H255 320 aa18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 PRDM5Q9NQX1 630 aaPredicted RBP18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 TMLHEQ9NVH6 421 aa18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 LYVE1Q9Y5Y7 322 aa18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 DOCK4Q8N1I0 1966 aa18.83■□□□□ 0.6
SNAPC3-206ENST00000490969 A0A0U1RQF3 1178 aa18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 A8MV72 311 aaPredicted RBP18.82■□□□□ 0.6
SNAPC3-206ENST00000490969 RGS14O43566 566 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms