RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 ZNF572Q7Z3I7 529 aaPredicted RBP7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 BTLAQ7Z6A9 289 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 DAAM2Q86T65 1068 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 C1QL4Q86Z23 238 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 ARHGEF19Q8IW93 802 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 FAM71AQ8IYT1 594 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 MMGT1Q8N4V1 131 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 SLC30A5Q8TAD4 765 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 C8orf44Q96CB5 159 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 WWC2-AS2Q96NR7 200 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 NAP1L3Q99457 506 aaPredicted RBP7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 PACSIN1Q9BY11 444 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 NIF3L1Q9GZT8 377 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 MIS12Q9H081 205 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 SIK2Q9H0K1 926 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 SLC26A1Q9H2B4 701 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 SOX17Q9H6I2 414 aaPredicted RBP7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 CATSPERBQ9H7T0 1116 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 CHODLQ9H9P2 273 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 C6orf203Q9P0P8 240 aaPredicted RBP7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 AMFRQ9UKV5 643 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 RAB21Q9UL25 225 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 KCNS2Q9ULS6 477 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 AP1M2Q9Y6Q5 423 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 DNAH9Q9NYC9 4486 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 STAB2Q8WWQ8 2551 aa7.08□□□□□ -1.28
EXOSC3-206ENST00000489414 FRAS1Q86XX4 4008 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 A0A1W2PQ72 361 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 DEFB108AA8MXU0 73 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 GOLGA8SH3BPF8 625 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 QSOX1O00391 747 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 DVL2O14641 736 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 GPR37O15354 613 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 ADAM11O75078 769 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 HLA-DRAP01903 254 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 PNMA6AP0CW24 399 aaPredicted RBP7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 GZMAP12544 262 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 ZFP36P26651 326 aaKnown RBP7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 CXCR5P32302 372 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 GGT5P36269 586 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 CD96P40200 585 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 GPR1P46091 355 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 YWHAEP62258 255 aaKnown RBP7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 GRM3Q14832 879 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 C1orf220Q5T0J3 134 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 C8orf74Q6P047 294 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 UNC5DQ6UXZ4 953 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 OVCH1Q7RTY7 1134 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 ZNF677Q86XU0 584 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 CAMK1DQ8IU85 385 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 CREG2Q8IUH2 290 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 GPR135Q8IZ08 494 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 BEST3Q8N1M1 668 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 UBL4BQ8N7F7 174 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 NETO2Q8NC67 525 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 SPATA4Q8NEY3 305 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 OR5M9Q8NGP3 310 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 TAS1R2Q8TE23 839 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 ISL2Q96A47 359 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 ECHDC3Q96DC8 303 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 TRIM11Q96F44 468 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 TRIM62Q9BVG3 475 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 OSGEPL1Q9H4B0 414 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 FAM204AQ9H8W3 233 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 ANKZF1Q9H8Y5 726 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 HRASLS2Q9NWW9 162 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 CTTNBP2NLQ9P2B4 639 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 TEKT2Q9UIF3 430 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 NENFQ9UMX5 172 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 KIAA1109Q2LD37 5005 aa7.07□□□□□ -1.28
EXOSC3-206ENST00000489414 SYNJ2BP-COX16A0A087WUM0 186 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 GOLGA6L10A0A0M3HER8 536 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 RBMY1BA6NDE4 496 aaKnown RBP7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 RBMY1EA6NEQ0 496 aaKnown RBP7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 C2orf81A6NN90 581 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 MIF4GDA9UHW6 222 aaKnown RBP7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 NPIPA2E9PIF3 369 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 NPIPA3F8WFD2 350 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 I6L893 689 aaPredicted RBP7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 PGRMC1O00264 195 aaKnown RBP7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 MATN3O15232 486 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 HS6ST1O60243 411 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 KIAA0513O60268 411 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 CEP104O60308 925 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 FTLP02792 175 aaPredicted RBP7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 GLI1P08151 1106 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 RBMY1DP0C7P1 496 aaKnown RBP7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 IGHV4-31P0DP07 118 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 CYP11B1P15538 503 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 TNNT3P45378 269 aaPredicted RBP7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 LMAN1P49257 510 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 RAB28P51157 221 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 NR0B1P51843 470 aaKnown RBP7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 HADHBP55084 474 aaKnown RBP7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 VSX2P58304 361 aaPredicted RBP7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 DCDC1P59894 354 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 RHOAP61586 193 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 CDR2Q01850 454 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 C2orf54Q08AI8 447 aa7.06□□□□□ -1.28
EXOSC3-206ENST00000489414 PPP2R5EQ16537 467 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms