RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 SLC4A11Q8NBS3 891 aa3□□□□□ -1.93
RBM28-207ENST00000488249 SLC38A9Q8NBW4 561 aa3□□□□□ -1.93
RBM28-207ENST00000488249 SLC24A4Q8NFF2 622 aa3□□□□□ -1.93
RBM28-207ENST00000488249 OR52I2Q8NH67 350 aa3□□□□□ -1.93
RBM28-207ENST00000488249 LRRC8CQ8TDW0 803 aa3□□□□□ -1.93
RBM28-207ENST00000488249 TRPC4APQ8TEL6 797 aa3□□□□□ -1.93
RBM28-207ENST00000488249 SCFD2Q8WU76 684 aa3□□□□□ -1.93
RBM28-207ENST00000488249 KCNE4Q8WWG9 221 aa3□□□□□ -1.93
RBM28-207ENST00000488249 RAPGEF5Q92565 580 aa3□□□□□ -1.93
RBM28-207ENST00000488249 MR1Q95460 341 aa3□□□□□ -1.93
RBM28-207ENST00000488249 RAB7BQ96AH8 199 aa3□□□□□ -1.93
RBM28-207ENST00000488249 PHF21AQ96BD5 680 aa3□□□□□ -1.93
RBM28-207ENST00000488249 LINGO1Q96FE5 620 aa3□□□□□ -1.93
RBM28-207ENST00000488249 ELMOD3Q96FG2 381 aa3□□□□□ -1.93
RBM28-207ENST00000488249 ZNF583Q96ND8 569 aa3□□□□□ -1.93
RBM28-207ENST00000488249 FAM111AQ96PZ2 611 aa3□□□□□ -1.93
RBM28-207ENST00000488249 RAB3IPQ96QF0 476 aaPredicted RBP3□□□□□ -1.93
RBM28-207ENST00000488249 GCNAQ96QF7 691 aa3□□□□□ -1.93
RBM28-207ENST00000488249 OR2A14Q96R47 310 aa3□□□□□ -1.93
RBM28-207ENST00000488249 SMC6Q96SB8 1091 aa3□□□□□ -1.93
RBM28-207ENST00000488249 ERP44Q9BS26 406 aa3□□□□□ -1.93
RBM28-207ENST00000488249 FAM129AQ9BZQ8 928 aa3□□□□□ -1.93
RBM28-207ENST00000488249 GLT8D2Q9H1C3 349 aa3□□□□□ -1.93
RBM28-207ENST00000488249 DPH5Q9H2P9 285 aa3□□□□□ -1.93
RBM28-207ENST00000488249 ZNF334Q9HCZ1 680 aaPredicted RBP3□□□□□ -1.93
RBM28-207ENST00000488249 SETD4Q9NVD3 440 aa3□□□□□ -1.93
RBM28-207ENST00000488249 MRPL15Q9P015 296 aaKnown RBP3□□□□□ -1.93
RBM28-207ENST00000488249 MARCH4Q9P2E8 410 aaPredicted RBP3□□□□□ -1.93
RBM28-207ENST00000488249 LIPT1Q9Y234 373 aa3□□□□□ -1.93
RBM28-207ENST00000488249 RPH3AQ9Y2J0 694 aaPredicted RBP3□□□□□ -1.93
RBM28-207ENST00000488249 TMEM184BQ9Y519 407 aaPredicted RBP3□□□□□ -1.93
RBM28-207ENST00000488249 DDX49Q9Y6V7 483 aaKnown RBP3□□□□□ -1.93
RBM28-207ENST00000488249 IGSF1Q8N6C5 1336 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 POLR2DO15514 142 aaKnown RBP2.99□□□□□ -1.93
RBM28-207ENST00000488249 OGG1O15527 345 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 PLPP2O43688 288 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 BUD23O43709 281 aaKnown RBP2.99□□□□□ -1.93
RBM28-207ENST00000488249 SYNGR3O43761 229 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 SPOPO43791 374 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 VEGFDO43915 354 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 GPC4O75487 556 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 PSMD10O75832 226 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 OR2C1O95371 312 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 IGHV4-39P01824 125 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 PRLRP16471 622 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 GM2AP17900 193 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 JAK1P23458 1154 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 CPT2P23786 658 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 PTAFRP25105 342 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 RPA1P27694 616 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 AHRP35869 848 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 TAGLN2P37802 199 aaKnown RBP2.99□□□□□ -1.93
RBM28-207ENST00000488249 CASP3P42574 277 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 CAPZA2P47755 286 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 OR1G1P47890 313 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 NR2C2P49116 596 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 GPR143P51810 404 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 GBX2P52951 348 aaPredicted RBP2.99□□□□□ -1.93
RBM28-207ENST00000488249 HADHBP55084 474 aaKnown RBP2.99□□□□□ -1.93
RBM28-207ENST00000488249 CASP9P55211 416 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 ELP6Q0PNE2 266 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 BNIP1Q12981 228 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 CHIT1Q13231 466 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 TRA2AQ13595 282 aaKnown RBP eCLIP2.99□□□□□ -1.933e-10■■■■■ 29.7
RBM28-207ENST00000488249 IRF3Q14653 427 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 CRYMQ14894 314 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 ASTE1Q2TB18 679 aaPredicted RBP2.99□□□□□ -1.93
RBM28-207ENST00000488249 AARDQ4LEZ3 155 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 SLC39A12Q504Y0 691 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 PLEKHS1Q5SXH7 462 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 CFAP77Q6ZQR2 320 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 LINC00696Q6ZRV3 163 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 Q75L30 129 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 CHST3Q7LGC8 479 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 LINC00346Q8IVM7 164 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 CCDC65Q8IXS2 484 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 SYCP3Q8IZU3 236 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 SLC7A5P1Q8MH63 180 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 KRT222Q8N1A0 295 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 SFRP1Q8N474 314 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 SLC5A8Q8N695 610 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 GCSAMQ8N6F7 178 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 TRIML2Q8N7C3 387 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 METTL21AQ8WXB1 218 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 PRCCQ92733 491 aaPredicted RBP2.99□□□□□ -1.93
RBM28-207ENST00000488249 SLC22A18Q96BI1 424 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 SPACA9Q96E40 222 aaPredicted RBP2.99□□□□□ -1.93
RBM28-207ENST00000488249 DTNBP1Q96EV8 351 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 ALG14Q96F25 216 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 DHTKD1Q96HY7 919 aaPredicted RBP2.99□□□□□ -1.93
RBM28-207ENST00000488249 CNOT6LQ96LI5 555 aaKnown RBP2.99□□□□□ -1.93
RBM28-207ENST00000488249 PGLYRP2Q96PD5 576 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 NUDCD1Q96RS6 583 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 SH3GL1Q99961 368 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 BCL7BQ9BQE9 202 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 NYXQ9GZU5 481 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 ABCG8Q9H221 673 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 SMARCAD1Q9H4L7 1026 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 IL1RAPL2Q9NP60 686 aa2.99□□□□□ -1.93
RBM28-207ENST00000488249 RPRD1BQ9NQG5 326 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms