RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ARSEP51690 589 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 ZNF135P52742 658 aaPredicted RBP11.1□□□□□ -0.63
TRIM56-204ENST00000487252 NUP107P57740 925 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 CBX1P83916 185 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 FMO1Q01740 532 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 RUNX1T1Q06455 604 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 ZNF33BQ06732 778 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 KRTAP1-1Q07627 177 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 NIPAL4Q0D2K0 466 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 TFDP3Q5H9I0 405 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 EMC4Q5J8M3 183 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 ACAD10Q6JQN1 1059 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 CNSTQ6PJW8 725 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 NEK10Q6ZWH5 1172 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 NLRP9Q7RTR0 991 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 ZNF677Q86XU0 584 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 CREG2Q8IUH2 290 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 MMGT1Q8N4V1 131 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 NOA1Q8NC60 698 aaKnown RBP11.1□□□□□ -0.63
TRIM56-204ENST00000487252 STT3BQ8TCJ2 826 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 DTX3LQ8TDB6 740 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 NSMCE1Q8WV22 266 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 OR2A14Q96R47 310 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 PEBP4Q96S96 227 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 SECISBP2Q96T21 854 aaKnown RBP11.1□□□□□ -0.63
TRIM56-204ENST00000487252 SNRNP25Q9BV90 132 aaKnown RBP11.1□□□□□ -0.63
TRIM56-204ENST00000487252 SELENOOQ9BVL4 669 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 TP63Q9H3D4 680 aaPredicted RBP11.1□□□□□ -0.63
TRIM56-204ENST00000487252 ETNK2Q9NVF9 386 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 RIC8BQ9NVN3 520 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 IL1RAPL1Q9NZN1 696 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 C3orf18Q9UK00 162 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 INTUQ9ULD6 942 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 HYOU1Q9Y4L1 999 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 HEBP2Q9Y5Z4 205 aa11.1□□□□□ -0.63
TRIM56-204ENST00000487252 DNAJC13O75165 2243 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 MPDZO75970 2070 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 IGLV3-12A0A075B6K2 115 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 LOC102723996A0A087X1L8 192 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 KLHL33A6NCF5 533 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 MGAT4DA6NG13 374 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 ZGLP1P0C6A0 271 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 SLC35G4P0C7Q5 338 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 TCP1P17987 556 aaKnown RBP11.09□□□□□ -0.63
TRIM56-204ENST00000487252 PTGER1P34995 402 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 AP2B1P63010 937 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 OGDHQ02218 1023 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 GABPB1Q06547 395 aaPredicted RBP11.09□□□□□ -0.63
TRIM56-204ENST00000487252 PMPCAQ10713 525 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 CBLBQ13191 982 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 TUBA3CQ13748 450 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 SNTB1Q13884 538 aaKnown RBP11.09□□□□□ -0.63
TRIM56-204ENST00000487252 GLIPR1L2Q4G1C9 344 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 FLYWCH1Q4VC44 716 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 BEND6Q5SZJ8 279 aaPredicted RBP11.09□□□□□ -0.63
TRIM56-204ENST00000487252 YOD1Q5VVQ6 348 aaPredicted RBP11.09□□□□□ -0.63
TRIM56-204ENST00000487252 H3F3CQ6NXT2 135 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 TUBA3EQ6PEY2 450 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 TMEM220Q6QAJ8 160 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 ACAD11Q709F0 780 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 ZNF571Q7Z3V5 609 aaPredicted RBP11.09□□□□□ -0.63
TRIM56-204ENST00000487252 TRIM73Q86UV7 250 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 AMIGO1Q86WK6 493 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 ATPAF2Q8N5M1 289 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 AMER2Q8N7J2 671 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 OR2L2Q8NH16 312 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 FAM222BQ8WU58 562 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 MAML1Q92585 1016 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 IMMP1LQ96LU5 166 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 Q96MF0 132 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 TTC25Q96NG3 672 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 SYT11Q9BT88 431 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 FUT8Q9BYC5 575 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 STK33Q9BYT3 514 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 MAGEE1Q9HCI5 957 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 EURLQ9NYK6 297 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 AMACRQ9UHK6 382 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 TEKT2Q9UIF3 430 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 GNPTGQ9UJJ9 305 aa11.09□□□□□ -0.63
TRIM56-204ENST00000487252 SCN2AQ99250 2005 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 A0A1B0GTH9 108 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 OR2AG2A6NM03 316 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 PHF1O43189 567 aaPredicted RBP11.08□□□□□ -0.64
TRIM56-204ENST00000487252 ERLIN1O75477 346 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 SASH3O75995 380 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 SEC31AO94979 1220 aaKnown RBP11.08□□□□□ -0.64
TRIM56-204ENST00000487252 MT-CYBP00156 380 aaPredicted RBP11.08□□□□□ -0.64
TRIM56-204ENST00000487252 MMP2P08253 660 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 ICAM2P13598 275 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 UGT2B7P16662 529 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 ZNF24P17028 368 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 CD96P40200 585 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 OR1D4P47884 311 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 CDR2Q01850 454 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 ITKQ08881 620 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 LONRF2Q1L5Z9 754 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 PPP6R3Q5H9R7 873 aaPredicted RBP11.08□□□□□ -0.64
TRIM56-204ENST00000487252 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.08□□□□□ -0.64
TRIM56-204ENST00000487252 LAPTM4BQ86VI4 370 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 PHF13Q86YI8 300 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms