RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 RSC1A1Q92681 617 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 FBXL8Q96CD0 374 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 MED8Q96G25 268 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 SCYL1Q96KG9 808 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 FCRL4Q96PJ5 515 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 TAAR9Q96RI9 348 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 UBL7Q96S82 380 aaPredicted RBP7.99□□□□□ -1.13
SF3A1-208ENST00000485618 DHRS4Q9BTZ2 278 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 IQCGQ9H095 443 aaKnown RBP7.99□□□□□ -1.13
SF3A1-208ENST00000485618 FBXO8Q9NRD0 319 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 SLC39A1Q9NY26 324 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 CD274Q9NZQ7 290 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 ANKMY1Q9P2S6 941 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 PDE10AQ9Y233 779 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 DYRK1BQ9Y463 629 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 LOXL2Q9Y4K0 774 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 OARD1Q9Y530 152 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 TNPO3Q9Y5L0 923 aaKnown RBP7.99□□□□□ -1.13
SF3A1-208ENST00000485618 SMG1Q96Q15 3661 aaKnown RBP7.99□□□□□ -1.13
SF3A1-208ENST00000485618 ITPR1Q14643 2758 aa7.99□□□□□ -1.13
SF3A1-208ENST00000485618 CELSR3Q9NYQ7 3312 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 A0A0J9YY10 115 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 CDC7O00311 574 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 BTN3A3O00478 584 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 TXNDC9O14530 226 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 KERAO60938 352 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 SMIM24O75264 130 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 TNFSF15O95150 251 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 GUCA1CO95843 209 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 PRB1P04280 392 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 F7P08709 466 aaPredicted RBP7.98□□□□□ -1.13
SF3A1-208ENST00000485618 HBQ1P09105 142 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 MSL3P1P0C860 447 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 SLC35E2BP0CK96 405 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 ERGP11308 486 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 CD1DP15813 335 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 UGT2B7P16662 529 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 NELFEP18615 380 aaKnown RBP7.98□□□□□ -1.13
SF3A1-208ENST00000485618 TAC1P20366 129 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 MPSTP25325 297 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 CSF2RBP32927 897 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 PIK3CGP48736 1102 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 ERVPABLB-1P60509 514 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 GABREP78334 506 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 MC2RQ01718 297 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 RELAQ04206 551 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 PRDX1Q06830 199 aaKnown RBP7.98□□□□□ -1.13
SF3A1-208ENST00000485618 FOXM1Q08050 763 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 ZNF460Q14592 562 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 RTP5Q14D33 572 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 METTL2BQ6P1Q9 378 aaKnown RBP7.98□□□□□ -1.13
SF3A1-208ENST00000485618 FOXR1Q6PIV2 292 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 AGTRAPQ6RW13 159 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 IGF2-ASQ6U949 168 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 ZNF574Q6ZN55 896 aaPredicted RBP7.98□□□□□ -1.13
SF3A1-208ENST00000485618 CMC1Q7Z7K0 106 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 C17orf64Q86WR6 236 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 HOMEZQ8IX15 550 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 GPR135Q8IZ08 494 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 ZNF480Q8WV37 535 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 SREK1Q8WXA9 508 aaKnown RBP7.98□□□□□ -1.13
SF3A1-208ENST00000485618 JPH3Q8WXH2 748 aaPredicted RBP7.98□□□□□ -1.13
SF3A1-208ENST00000485618 ISL2Q96A47 359 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 CCDC126Q96EE4 140 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 SLC41A2Q96JW4 573 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 ZNF578Q96N58 590 aaPredicted RBP7.98□□□□□ -1.13
SF3A1-208ENST00000485618 OR2A14Q96R47 310 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 MAP3K3Q99759 626 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 MRPL57Q9BQC6 102 aaKnown RBP7.98□□□□□ -1.13
SF3A1-208ENST00000485618 TMEM109Q9BVC6 243 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 DDA1Q9BW61 102 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 NLNQ9BYT8 704 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 PITPNM3Q9BZ71 974 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 SLC7A5P2Q9GIP4 190 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 ALG9Q9H6U8 611 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 MRPS30Q9NP92 439 aaKnown RBP7.98□□□□□ -1.13
SF3A1-208ENST00000485618 NUDT4Q9NZJ9 180 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 OGFRQ9NZT2 677 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 SENP1Q9P0U3 644 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 SEMA5BQ9P283 1151 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 TBK1Q9UHD2 729 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 MID2Q9UJV3 735 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 RARRES3Q9UL19 164 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 PLAGL1Q9UM63 463 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 KCNE2Q9Y6J6 123 aa7.98□□□□□ -1.13
SF3A1-208ENST00000485618 IGHV5-51A0A0C4DH38 117 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 NPEPPSL1A6NEC2 478 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 SLC9B1P1A6NJY1 282 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 SMIM23A6NLE4 172 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 EFCAB7A8K855 629 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 SUPT3HB4E1H0 165 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 E7ENX8 843 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 NVLO15381 856 aaKnown RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 RGS16O15492 202 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 SRPX2O60687 465 aaPredicted RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 SUPT3HO75486 399 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 DXOO77932 396 aaKnown RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 ALDOAP04075 364 aaKnown RBP7.97□□□□□ -1.13
SF3A1-208ENST00000485618 CCNYL3P0C7X3 344 aa7.97□□□□□ -1.13
SF3A1-208ENST00000485618 GFAPP14136 432 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms