RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 NACC2Q96BF6 587 aa24.62■■□□□ 1.53
HLA-F-227ENST00000485513 TCF12Q99081 682 aa24.62■■□□□ 1.53
HLA-F-227ENST00000485513 SLC29A3Q9BZD2 475 aa24.62■■□□□ 1.53
HLA-F-227ENST00000485513 ZNF552Q9H707 407 aaPredicted RBP24.62■■□□□ 1.53
HLA-F-227ENST00000485513 WDR54Q9H977 334 aa24.62■■□□□ 1.53
HLA-F-227ENST00000485513 ATP13A2Q9NQ11 1180 aa24.62■■□□□ 1.53
HLA-F-227ENST00000485513 ENAMQ9NRM1 1142 aa24.62■■□□□ 1.53
HLA-F-227ENST00000485513 TSR3Q9UJK0 312 aaKnown RBP24.62■■□□□ 1.53
HLA-F-227ENST00000485513 CTSVO60911 334 aa24.61■■□□□ 1.53
HLA-F-227ENST00000485513 NIPSNAP2O75323 286 aa24.61■■□□□ 1.53
HLA-F-227ENST00000485513 IPO13O94829 963 aaKnown RBP24.61■■□□□ 1.53
HLA-F-227ENST00000485513 MMP11P24347 488 aa24.61■■□□□ 1.53
HLA-F-227ENST00000485513 TERF1P54274 439 aa24.61■■□□□ 1.53
HLA-F-227ENST00000485513 SOX8P57073 446 aa24.61■■□□□ 1.53
HLA-F-227ENST00000485513 TRIP13Q15645 432 aaPredicted RBP24.61■■□□□ 1.53
HLA-F-227ENST00000485513 FAM214AQ32MH5 1076 aa24.61■■□□□ 1.53
HLA-F-227ENST00000485513 PLEKHN1Q494U1 663 aaPredicted RBP24.61■■□□□ 1.53
HLA-F-227ENST00000485513 COX15Q7KZN9 410 aa24.61■■□□□ 1.53
HLA-F-227ENST00000485513 OR2L3Q8NG85 312 aa24.61■■□□□ 1.53
HLA-F-227ENST00000485513 ZDHHC19Q8WVZ1 309 aaPredicted RBP24.61■■□□□ 1.53
HLA-F-227ENST00000485513 SLC26A1Q9H2B4 701 aa24.61■■□□□ 1.53
HLA-F-227ENST00000485513 SPATA7Q9P0W8 599 aa24.61■■□□□ 1.53
HLA-F-227ENST00000485513 CDC23Q9UJX2 597 aa24.61■■□□□ 1.53
HLA-F-227ENST00000485513 B3GNT3Q9Y2A9 372 aa24.61■■□□□ 1.53
HLA-F-227ENST00000485513 KLK4Q9Y5K2 254 aa24.61■■□□□ 1.53
HLA-F-227ENST00000485513 FAM169AQ9Y6X4 670 aa24.61■■□□□ 1.53
HLA-F-227ENST00000485513 FITM1A5D6W6 292 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 TCP11X1B4DZS4 312 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 SRPX2O60687 465 aaPredicted RBP24.6■■□□□ 1.53
HLA-F-227ENST00000485513 ESR1P03372 595 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 ATP5DP30049 168 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 VSX2P58304 361 aaPredicted RBP24.6■■□□□ 1.53
HLA-F-227ENST00000485513 SARNPP82979 210 aaKnown RBP24.6■■□□□ 1.53
HLA-F-227ENST00000485513 AIMP2Q13155 320 aaKnown RBP24.6■■□□□ 1.53
HLA-F-227ENST00000485513 GBX1Q14549 363 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 NKG7Q16617 165 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 KIAA0930Q6ICG6 404 aaPredicted RBP24.6■■□□□ 1.53
HLA-F-227ENST00000485513 IGFL3Q6UXB1 125 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 IQCKQ8N0W5 287 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 PRELID2Q8N945 189 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 OR2A1Q8NGT9 310 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 TM9SF4Q92544 642 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 FAM136AQ96C01 138 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 SPSB2Q99619 263 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 IL1RAPL1Q9NZN1 696 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 FBXL4Q9UKA2 621 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 CRYL1Q9Y2S2 319 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 ICE1Q9Y2F5 2266 aa24.6■■□□□ 1.53
HLA-F-227ENST00000485513 MATN4O95460 622 aa24.59■■□□□ 1.53
HLA-F-227ENST00000485513 CHRM3P20309 590 aa24.59■■□□□ 1.53
HLA-F-227ENST00000485513 OGNP20774 298 aaKnown RBP24.59■■□□□ 1.53
HLA-F-227ENST00000485513 VPS41P49754 854 aa24.59■■□□□ 1.53
HLA-F-227ENST00000485513 ADARP55265 1226 aaKnown RBP24.59■■□□□ 1.53
HLA-F-227ENST00000485513 KCNJ11Q14654 390 aa24.59■■□□□ 1.53
HLA-F-227ENST00000485513 WASHC2DQ5SRD0 308 aa24.59■■□□□ 1.53
HLA-F-227ENST00000485513 METTL27Q8N6F8 245 aaPredicted RBP24.59■■□□□ 1.53
HLA-F-227ENST00000485513 SLC6A20Q9NP91 592 aa24.59■■□□□ 1.53
HLA-F-227ENST00000485513 NXT1Q9UKK6 140 aaKnown RBP24.59■■□□□ 1.53
HLA-F-227ENST00000485513 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.58■■□□□ 1.53
HLA-F-227ENST00000485513 A0A1W2PPV9 198 aa24.58■■□□□ 1.53
HLA-F-227ENST00000485513 AVILO75366 819 aa24.58■■□□□ 1.53
HLA-F-227ENST00000485513 PAMP19021 973 aa24.58■■□□□ 1.53
HLA-F-227ENST00000485513 ITGA3P26006 1051 aa24.58■■□□□ 1.53
HLA-F-227ENST00000485513 MAGEA6P43360 314 aa24.58■■□□□ 1.53
HLA-F-227ENST00000485513 OR1D4P47884 311 aa24.58■■□□□ 1.53
HLA-F-227ENST00000485513 GPS1Q13098 491 aa24.58■■□□□ 1.53
HLA-F-227ENST00000485513 ARMC3Q5W041 872 aa24.58■■□□□ 1.53
HLA-F-227ENST00000485513 FRMPD2BQ6IN97 320 aa24.58■■□□□ 1.53
HLA-F-227ENST00000485513 CASC4Q6P4E1 433 aa24.58■■□□□ 1.53
HLA-F-227ENST00000485513 SHISA6Q6ZSJ9 500 aa24.58■■□□□ 1.53
HLA-F-227ENST00000485513 ZADH2Q8N4Q0 377 aa24.58■■□□□ 1.53
HLA-F-227ENST00000485513 SNRNP40Q96DI7 357 aaKnown RBP24.58■■□□□ 1.53
HLA-F-227ENST00000485513 C19orf60Q96EN9 201 aa24.58■■□□□ 1.53
HLA-F-227ENST00000485513 ILKAPQ9H0C8 392 aaPredicted RBP24.58■■□□□ 1.53
HLA-F-227ENST00000485513 SOX17Q9H6I2 414 aaPredicted RBP24.58■■□□□ 1.53
HLA-F-227ENST00000485513 CTSFQ9UBX1 484 aa24.58■■□□□ 1.53
HLA-F-227ENST00000485513 DOCK10Q96BY6 2186 aa24.57■■□□□ 1.52
HLA-F-227ENST00000485513 A0A0J9YVX5 310 aa24.57■■□□□ 1.52
HLA-F-227ENST00000485513 HYKKA2RU49 373 aa24.57■■□□□ 1.52
HLA-F-227ENST00000485513 SOCS6O14544 535 aa24.57■■□□□ 1.52
HLA-F-227ENST00000485513 MRPL49Q13405 166 aaKnown RBP24.57■■□□□ 1.52
HLA-F-227ENST00000485513 FASTKQ14296 549 aaKnown RBP24.57■■□□□ 1.52
HLA-F-227ENST00000485513 NAA25Q14CX7 972 aa24.57■■□□□ 1.52
HLA-F-227ENST00000485513 PRAMEF13Q5VWM6 474 aa24.57■■□□□ 1.52
HLA-F-227ENST00000485513 NEPROQ6NW34 567 aa24.57■■□□□ 1.52
HLA-F-227ENST00000485513 RNF44Q7L0R7 432 aa24.57■■□□□ 1.52
HLA-F-227ENST00000485513 LRRC8AQ8IWT6 810 aa24.57■■□□□ 1.52
HLA-F-227ENST00000485513 OR9A1PQ8NGU1 263 aa24.57■■□□□ 1.52
HLA-F-227ENST00000485513 SAMD15Q9P1V8 674 aa24.57■■□□□ 1.52
HLA-F-227ENST00000485513 GALPQ9UBC7 116 aa24.57■■□□□ 1.52
HLA-F-227ENST00000485513 ZC3H7BQ9UGR2 993 aaKnown RBP24.57■■□□□ 1.52
HLA-F-227ENST00000485513 VPS9D1Q9Y2B5 631 aa24.57■■□□□ 1.52
HLA-F-227ENST00000485513 HS3ST3B1Q9Y662 390 aa24.57■■□□□ 1.52
HLA-F-227ENST00000485513 MAU2Q9Y6X3 613 aa24.57■■□□□ 1.52
HLA-F-227ENST00000485513 LOC105369274A0A096LPK9 316 aa24.56■■□□□ 1.52
HLA-F-227ENST00000485513 LOC102723532A0A0G2JNH3 316 aa24.56■■□□□ 1.52
HLA-F-227ENST00000485513 ARHGEF33A8MVX0 844 aa24.56■■□□□ 1.52
HLA-F-227ENST00000485513 E5RI56 91 aa24.56■■□□□ 1.52
HLA-F-227ENST00000485513 NRP2O60462 931 aa24.56■■□□□ 1.52
HLA-F-227ENST00000485513 SEMA7AO75326 666 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms