RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 LINC00615Q96LM1 132 aaPredicted RBP3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 CFAP57Q96MR6 1250 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 FNBP1Q96RU3 617 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 RAD9AQ99638 391 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 URM1Q9BTM9 101 aaKnown RBP3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 RBM4Q9BWF3 364 aaKnown RBP3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 BARHL1Q9BZE3 327 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 MYNNQ9NPC7 610 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 SCRT2Q9NQ03 307 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 SDR39U1Q9NRG7 319 aaPredicted RBP3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 FGF21Q9NSA1 209 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 C5AR2Q9P296 337 aa3.55□□□□□ -1.84
SMARCA1-204ENST00000478420 PSMD14O00487 310 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 PAK4O96013 591 aaPredicted RBP3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 QDPRP09417 244 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 GNB3P16520 340 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 IFNAR1P17181 557 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 JAK1P23458 1154 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 EEF1B2P24534 225 aaKnown RBP3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 MPZP25189 248 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 ASCL1P50553 236 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 MAPK12P53778 367 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 B3GALT5-AS1P59052 145 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 KRTAP10-7P60409 375 aaPredicted RBP3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 HERV-K104P61576 105 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 GNB1P62873 340 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 RBP5P82980 135 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 ZNF415Q09FC8 603 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 PPIGQ13427 754 aaKnown RBP eCLIP3.54□□□□□ -1.843e-10■■□□□ 12.7
SMARCA1-204ENST00000478420 CA9Q16790 459 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 KIF26BQ2KJY2 2108 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 CYP4A22Q5TCH4 519 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 GALNT17Q6IS24 598 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 ALKBH5Q6P6C2 394 aaKnown RBP3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 CNSTQ6PJW8 725 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 RBPMS2Q6ZRY4 209 aaKnown RBP3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 ZBTB49Q6ZSB9 765 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 MCM10Q7L590 875 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 CCDC91Q7Z6B0 441 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 MAML2Q8IZL2 1156 aaPredicted RBP3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 NUP93Q8N1F7 819 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 XXYLT1Q8NBI6 393 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 SLC4A11Q8NBS3 891 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 OR6J1Q8NGC5 347 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 OR11H4Q8NGC9 324 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 RMDN1Q96DB5 314 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 THOC1Q96FV9 657 aaKnown RBP3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 LRR1Q96L50 414 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 LITAFQ99732 161 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 PANK2Q9BZ23 570 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 C2orf42Q9NWW7 574 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 MDFICQ9P1T7 246 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 XPO7Q9UIA9 1087 aaKnown RBP3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 RASAL2Q9UJF2 1139 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 NAP1L2Q9ULW6 460 aaPredicted RBP3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 ATP6V0A2Q9Y487 856 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 TRIM17Q9Y577 477 aa3.54□□□□□ -1.84
SMARCA1-204ENST00000478420 URADA6NGE7 173 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 PTGESO14684 152 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 ZG16O60844 167 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 TRMUO75648 421 aaKnown RBP3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 SLCO2B1O94956 709 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 CELF2O95319 508 aaKnown RBP3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 NADKO95544 446 aaPredicted RBP3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 FYNP06241 537 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 ATP5BP06576 529 aaKnown RBP3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 HMBSP08397 361 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 THEGLP0DJG4 465 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 HAPLN1P10915 354 aaPredicted RBP3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 CDH3P22223 829 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 WNT5AP41221 380 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 ATP12AP54707 1039 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 MAZP56270 477 aaKnown RBP3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 RBPJQ06330 500 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 C17orf67Q0P5P2 114 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 TFCP2Q12800 502 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 BFSP1Q12934 665 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 COG2Q14746 738 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 P2RY6Q15077 328 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 PARP10Q53GL7 1025 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 SPDYCQ5MJ68 293 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 FFAR4Q5NUL3 377 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 ZNF790Q6PG37 636 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 GSG1LQ6UXU4 331 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 RAPH1Q70E73 1250 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 NUP54Q7Z3B4 507 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 RTN4RL2Q86UN3 420 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 MFN1Q8IWA4 741 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 EID3Q8N140 333 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 ZNF619Q8N2I2 560 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 ZNF611Q8N823 705 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 THAP8Q8NA92 274 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 ZNF248Q8NDW4 579 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 KBTBD8Q8NFY9 601 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 GDAP1Q8TB36 358 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 SUSD6Q92537 303 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 ZNF653Q96CK0 615 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 TSGA13Q96PP4 275 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 FEVQ99581 238 aa3.53□□□□□ -1.84
SMARCA1-204ENST00000478420 ERVMER34-1Q9H9K5 563 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms