RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-231ENST00000477334 CCDC3Q9BQI4 270 aa3.8□□□□□ -1.8
RBM39-231ENST00000477334 SLC25A23Q9BV35 468 aa3.8□□□□□ -1.8
RBM39-231ENST00000477334 SLC2A11Q9BYW1 496 aa3.8□□□□□ -1.8
RBM39-231ENST00000477334 SHARPINQ9H0F6 387 aa3.8□□□□□ -1.8
RBM39-231ENST00000477334 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.8□□□□□ -1.8
RBM39-231ENST00000477334 KCNK7Q9Y2U2 307 aa3.8□□□□□ -1.8
RBM39-231ENST00000477334 LIPGQ9Y5X9 500 aa3.8□□□□□ -1.8
RBM39-231ENST00000477334 CDC123O75794 336 aaPredicted RBP3.79□□□□□ -1.8
RBM39-231ENST00000477334 DFFBO76075 338 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 RECQL5O94762 991 aaPredicted RBP3.79□□□□□ -1.8
RBM39-231ENST00000477334 GSRP00390 522 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 GPIP06744 558 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 FDPSP14324 419 aaKnown RBP3.79□□□□□ -1.8
RBM39-231ENST00000477334 PTAFRP25105 342 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 CD27P26842 260 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 CSTF2P33240 577 aaKnown RBP eCLIP3.79□□□□□ -1.8
RBM39-231ENST00000477334 MAGEA11P43364 429 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 ATP12AP54707 1039 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 HERV-K104P61576 105 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 PPIGQ13427 754 aaKnown RBP eCLIP3.79□□□□□ -1.83e-76■□□□□ 10.5
RBM39-231ENST00000477334 PHKG1Q16816 387 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 TMEM30BQ3MIR4 351 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 KIRREL3Q8IZU9 778 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 CCAR2Q8N163 923 aaKnown RBP3.79□□□□□ -1.8
RBM39-231ENST00000477334 SUSD6Q92537 303 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 EXT2Q93063 718 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 KATNB1Q9BVA0 655 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 FZD8Q9H461 694 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 Q9H8V8 135 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 TRPV4Q9HBA0 871 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 DNAJC4Q9NNZ3 241 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 POLLQ9UGP5 575 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 ANAPC5Q9UJX4 755 aa3.79□□□□□ -1.8
RBM39-231ENST00000477334 MRPS28Q9Y2Q9 187 aaKnown RBP3.79□□□□□ -1.8
RBM39-231ENST00000477334 DISP3Q9P2K9 1392 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 EDIL3O43854 480 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 EPCAMP16422 314 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 ALDH4A1P30038 563 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 ZNF273Q14593 569 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 SLC35D3Q5M8T2 416 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 SUSD1Q6UWL2 747 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 FAM47EQ6ZV65 393 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 ERN2Q76MJ5 926 aaKnown RBP3.78□□□□□ -1.8
RBM39-231ENST00000477334 NOTCH2NLQ7Z3S9 236 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 ADCK2Q7Z695 626 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 IQUBQ8NA54 791 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 DDHD1Q8NEL9 900 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 OR10Q1Q8NGQ4 319 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 OR13C3Q8NGS6 347 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 CTCFLQ8NI51 663 aaPredicted RBP3.78□□□□□ -1.8
RBM39-231ENST00000477334 KCNE4Q8WWG9 221 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 PROX1Q92786 737 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 RBM4Q9BWF3 364 aaKnown RBP3.78□□□□□ -1.8
RBM39-231ENST00000477334 GTPBP2Q9BX10 602 aaKnown RBP3.78□□□□□ -1.8
RBM39-231ENST00000477334 PANK2Q9BZ23 570 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 CPVLQ9H3G5 476 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 TLE6Q9H808 572 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 TXNDC16Q9P2K2 825 aa3.78□□□□□ -1.8
RBM39-231ENST00000477334 IGHV4-4A0A075B6R2 117 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 CASTOR2A6NHX0 329 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 PSMD14O00487 310 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 KLF11O14901 512 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 AP2A2O94973 939 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 APOHP02749 345 aaPredicted RBP3.77□□□□□ -1.81
RBM39-231ENST00000477334 RAF1P04049 648 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 KLC1Q07866 573 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 NPTX1Q15818 432 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 ADAM5Q6NVV9 412 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 BHLHB9Q6PI77 547 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 FAM219AQ8IW50 185 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 RYBPQ8N488 228 aaPredicted RBP3.77□□□□□ -1.81
RBM39-231ENST00000477334 KLHDC1Q8N7A1 406 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 ZNF248Q8NDW4 579 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 RMDN2Q96LZ7 410 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 ZMAT2Q96NC0 199 aaKnown RBP3.77□□□□□ -1.81
RBM39-231ENST00000477334 BARHL1Q9BZE3 327 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 ZMYND12Q9H0C1 365 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 XAB2Q9HCS7 855 aaKnown RBP3.77□□□□□ -1.81
RBM39-231ENST00000477334 PFDN4Q9NQP4 134 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 PYGO1Q9Y3Y4 419 aa3.77□□□□□ -1.81
RBM39-231ENST00000477334 RPS6KA5O75582 802 aa3.76□□□□□ -1.81
RBM39-231ENST00000477334 ATP6AP2O75787 350 aa3.76□□□□□ -1.81
RBM39-231ENST00000477334 HSPA4LO95757 839 aa3.76□□□□□ -1.81
RBM39-231ENST00000477334 QDPRP09417 244 aa3.76□□□□□ -1.81
RBM39-231ENST00000477334 PDGFRAP16234 1089 aa3.76□□□□□ -1.81
RBM39-231ENST00000477334 LHCGRP22888 699 aa3.76□□□□□ -1.81
RBM39-231ENST00000477334 ACAT1P24752 427 aaKnown RBP3.76□□□□□ -1.81
RBM39-231ENST00000477334 CDC25CP30307 473 aa3.76□□□□□ -1.81
RBM39-231ENST00000477334 NPY4RP50391 375 aa3.76□□□□□ -1.81
RBM39-231ENST00000477334 ALDH3A2P51648 485 aa3.76□□□□□ -1.81
RBM39-231ENST00000477334 VAMP7P51809 220 aa3.76□□□□□ -1.81
RBM39-231ENST00000477334 LBX1P52954 281 aa3.76□□□□□ -1.81
RBM39-231ENST00000477334 GSDMDP57764 484 aa3.76□□□□□ -1.81
RBM39-231ENST00000477334 SNRPD1P62314 119 aaKnown RBP3.76□□□□□ -1.81
RBM39-231ENST00000477334 ITGA9Q13797 1035 aa3.76□□□□□ -1.81
RBM39-231ENST00000477334 HNRNPDQ14103 355 aaKnown RBP3.76□□□□□ -1.81
RBM39-231ENST00000477334 PSMD6Q15008 389 aa3.76□□□□□ -1.81
RBM39-231ENST00000477334 NONOQ15233 471 aaKnown RBP eCLIP3.76□□□□□ -1.81
RBM39-231ENST00000477334 LACTB2Q53H82 288 aaPredicted RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms