RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 COL28A1Q2UY09 1125 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.33□□□□□ -0.92
HDAC3-208ENST00000476739 TMTC4Q5T4D3 741 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 GRTP1Q5TC63 336 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 SBSNQ6UWP8 590 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 LRRC69Q6ZNQ3 347 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 CMC1Q7Z7K0 106 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 DNAJC22Q8N4W6 341 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 GALNT6Q8NCL4 622 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 OR2L3Q8NG85 312 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 FCRL4Q96PJ5 515 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 TEFMQ96QE5 360 aaKnown RBP9.33□□□□□ -0.92
HDAC3-208ENST00000476739 ZPBPQ9BS86 351 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 FUT8Q9BYC5 575 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 TXLNGYQ9BZA5 131 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 DPH1Q9BZG8 443 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 ULBP3Q9BZM4 244 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 ATG10Q9H0Y0 220 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 ACSS3Q9H6R3 686 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 AKIRIN1Q9H9L7 192 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-208ENST00000476739 PARVBQ9HBI1 364 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 CPNE5Q9HCH3 593 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 GPAMQ9HCL2 828 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 SLC6A20Q9NP91 592 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 UTP6Q9NYH9 597 aaKnown RBP9.33□□□□□ -0.92
HDAC3-208ENST00000476739 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-208ENST00000476739 STOX2Q9P2F5 926 aaPredicted RBP9.33□□□□□ -0.92
HDAC3-208ENST00000476739 TXNDC16Q9P2K2 825 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 TAC3Q9UHF0 121 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 SH2B3Q9UQQ2 575 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 LOC101059948A0A1B0GTJ6 334 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 NPEPPSL1A6NEC2 478 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 H3BMH7 237 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 SLC16A5O15375 505 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 CTIFO43310 598 aaKnown RBP9.32□□□□□ -0.92
HDAC3-208ENST00000476739 CTSVO60911 334 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 GUCA1CO95843 209 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 STMN1P16949 149 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 CYP2A7P20853 494 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 PHBP35232 272 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 SPRP35270 261 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-208ENST00000476739 TBPL1P62380 186 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 DLG1Q12959 904 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 SP140Q13342 867 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 SLMAPQ14BN4 828 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 ARHGAP19Q14CB8 494 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 UAP1Q16222 522 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-208ENST00000476739 PPP1R3AQ16821 1122 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 MROH9Q5TGP6 573 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 LRRC8EQ6NSJ5 796 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 FIGLAQ6QHK4 219 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 SYTL1Q8IYJ3 562 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 CACNA2D3Q8IZS8 1091 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 NLGN4XQ8N0W4 816 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 RAB42Q8N4Z0 105 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 NKAPQ8N5F7 415 aaKnown RBP9.32□□□□□ -0.92
HDAC3-208ENST00000476739 NLGN4YQ8NFZ3 816 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-208ENST00000476739 MCOLN3Q8TDD5 553 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 SMPDL3AQ92484 453 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 SLC22A18Q96BI1 424 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 TCTN2Q96GX1 697 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 PDLIM5Q96HC4 596 aaKnown RBP9.32□□□□□ -0.92
HDAC3-208ENST00000476739 CCDC138Q96M89 665 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 SPRTNQ9H040 489 aaPredicted RBP9.32□□□□□ -0.92
HDAC3-208ENST00000476739 EPB41L4BQ9H329 900 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 ANKZF1Q9H8Y5 726 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 POPDC3Q9HBV1 291 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 SYTL2Q9HCH5 934 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 EPG5Q9HCE0 2579 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 CACNA1BQ00975 2339 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 HEATR5BQ9P2D3 2071 aa9.32□□□□□ -0.92
HDAC3-208ENST00000476739 SCRG1O75711 98 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 MSL3P1P0C860 447 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 SLC35E2BP0CK96 405 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 CCDC166P0CW27 439 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 LIFP15018 202 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 CD1DP15813 335 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 F8A1P23610 371 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 GCAP28676 217 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 RPA3P35244 121 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-208ENST00000476739 HSD17B2P37059 387 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 CSRP3P50461 194 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 SLC12A2P55011 1212 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 RAB10P61026 200 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 IRF9Q00978 393 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 GPS2Q13227 327 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 NAB1Q13506 487 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 CSHL1Q14406 222 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 TSNQ15631 228 aaKnown RBP9.31□□□□□ -0.92
HDAC3-208ENST00000476739 C18orf21Q32NC0 220 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-208ENST00000476739 ICE2Q659A1 982 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 LCN10Q6JVE6 187 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 FBXO42Q6P3S6 717 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 FAM199XQ6PEV8 388 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-208ENST00000476739 AGTRAPQ6RW13 159 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 C6orf15Q6UXA7 325 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-208ENST00000476739 CEP128Q6ZU80 1094 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 BPHLQ86WA6 291 aaPredicted RBP9.31□□□□□ -0.92
HDAC3-208ENST00000476739 TMEM126BQ8IUX1 230 aa9.31□□□□□ -0.92
HDAC3-208ENST00000476739 IL22RA1Q8N6P7 574 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms