RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 LCN10Q6JVE6 187 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 LRRC8EQ6NSJ5 796 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 SUSD1Q6UWL2 747 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 CYHR1Q6ZMK1 362 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 ZNF517Q6ZMY9 492 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-223ENST00000475146 CAPN12Q6ZSI9 719 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 MCATQ8IVS2 390 aaKnown RBP23.09■■□□□ 1.29
CPNE1-223ENST00000475146 RAB17Q9H0T7 212 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 FARSAQ9Y285 508 aaKnown RBP23.09■■□□□ 1.29
CPNE1-223ENST00000475146 ATXN8OSP0DMR3 200 aa23.08■■□□□ 1.29
CPNE1-223ENST00000475146 AGXTP21549 392 aa23.08■■□□□ 1.29
CPNE1-223ENST00000475146 CMPK1P30085 196 aa23.08■■□□□ 1.29
CPNE1-223ENST00000475146 PNLIPRP1P54315 467 aa23.08■■□□□ 1.29
CPNE1-223ENST00000475146 TIAL1Q01085 375 aaKnown RBP eCLIP23.08■■□□□ 1.29
CPNE1-223ENST00000475146 COL9A2Q14055 689 aaPredicted RBP23.08■■□□□ 1.29
CPNE1-223ENST00000475146 FRG1Q14331 258 aaKnown RBP23.08■■□□□ 1.29
CPNE1-223ENST00000475146 DUPD1Q68J44 220 aa23.08■■□□□ 1.29
CPNE1-223ENST00000475146 TLDC1Q6P9B6 456 aa23.08■■□□□ 1.29
CPNE1-223ENST00000475146 PAQR3Q6TCH7 311 aa23.08■■□□□ 1.29
CPNE1-223ENST00000475146 UBE2R2Q712K3 238 aaPredicted RBP23.08■■□□□ 1.29
CPNE1-223ENST00000475146 MYO1HQ8N1T3 1032 aa23.08■■□□□ 1.29
CPNE1-223ENST00000475146 FBXO15Q8NCQ5 510 aaPredicted RBP23.08■■□□□ 1.29
CPNE1-223ENST00000475146 OR2A1Q8NGT9 310 aa23.08■■□□□ 1.29
CPNE1-223ENST00000475146 SAYSD1Q9NPB0 183 aa23.08■■□□□ 1.29
CPNE1-223ENST00000475146 TXLNGQ9NUQ3 528 aa23.08■■□□□ 1.29
CPNE1-223ENST00000475146 CORO1CQ9ULV4 474 aaPredicted RBP23.08■■□□□ 1.29
CPNE1-223ENST00000475146 SRPK3Q9UPE1 567 aa23.08■■□□□ 1.29
CPNE1-223ENST00000475146 H3BMH7 237 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 GFYI3L273 518 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 URI1O94763 535 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-223ENST00000475146 SLC16A8O95907 504 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 POLE2P56282 527 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 PDAP1Q13442 181 aaKnown RBP23.07■■□□□ 1.28
CPNE1-223ENST00000475146 HECTD2Q5U5R9 776 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 C1orf189Q5VU69 101 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 FAM198BQ6UWH4 519 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 ZNF572Q7Z3I7 529 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-223ENST00000475146 ZNF843Q8N446 348 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 ENDOVQ8N8Q3 282 aaKnown RBP23.07■■□□□ 1.28
CPNE1-223ENST00000475146 PPFIBP2Q8ND30 876 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 PYROXD1Q8WU10 500 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 EEF1AKMT1Q8WVE0 214 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 ZNF592Q92610 1267 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 ZUFSPQ96AP4 578 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 LINGO1Q96FE5 620 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 NDC1Q9BTX1 674 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 ABCF3Q9NUQ8 709 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 GRHL1Q9NZI5 618 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 CDC23Q9UJX2 597 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 POLHQ9Y253 713 aa23.07■■□□□ 1.28
CPNE1-223ENST00000475146 TARM1B6A8C7 271 aa23.06■■□□□ 1.28
CPNE1-223ENST00000475146 C9J4A7 227 aa23.06■■□□□ 1.28
CPNE1-223ENST00000475146 FURINP09958 794 aa23.06■■□□□ 1.28
CPNE1-223ENST00000475146 NAA25Q14CX7 972 aa23.06■■□□□ 1.28
CPNE1-223ENST00000475146 FAM45BPQ6NSW5 357 aa23.06■■□□□ 1.28
CPNE1-223ENST00000475146 RHBDD2Q6NTF9 364 aa23.06■■□□□ 1.28
CPNE1-223ENST00000475146 SYVN1Q86TM6 617 aa23.06■■□□□ 1.28
CPNE1-223ENST00000475146 PALM2Q8IXS6 379 aa23.06■■□□□ 1.28
CPNE1-223ENST00000475146 FAM45AQ8TCE6 357 aa23.06■■□□□ 1.28
CPNE1-223ENST00000475146 ZNF480Q8WV37 535 aa23.06■■□□□ 1.28
CPNE1-223ENST00000475146 APOBEC4Q8WW27 367 aaKnown RBP23.06■■□□□ 1.28
CPNE1-223ENST00000475146 SEC14L1Q92503 715 aa23.06■■□□□ 1.28
CPNE1-223ENST00000475146 DPH2Q9BQC3 489 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-223ENST00000475146 SELENOSQ9BQE4 189 aa23.06■■□□□ 1.28
CPNE1-223ENST00000475146 DHCR7Q9UBM7 475 aaKnown RBP23.06■■□□□ 1.28
CPNE1-223ENST00000475146 TAC3Q9UHF0 121 aa23.06■■□□□ 1.28
CPNE1-223ENST00000475146 SNX7Q9UNH6 387 aa23.06■■□□□ 1.28
CPNE1-223ENST00000475146 EIF3HO15372 352 aaKnown RBP eCLIP23.05■■□□□ 1.28
CPNE1-223ENST00000475146 RAB40ALP0C0E4 278 aa23.05■■□□□ 1.28
CPNE1-223ENST00000475146 SFTPCP11686 197 aa23.05■■□□□ 1.28
CPNE1-223ENST00000475146 PLTPP55058 493 aa23.05■■□□□ 1.28
CPNE1-223ENST00000475146 STRA8Q7Z7C7 330 aa23.05■■□□□ 1.28
CPNE1-223ENST00000475146 PROKR1Q8TCW9 393 aa23.05■■□□□ 1.28
CPNE1-223ENST00000475146 DPH7Q9BTV6 452 aa23.05■■□□□ 1.28
CPNE1-223ENST00000475146 NLNQ9BYT8 704 aa23.05■■□□□ 1.28
CPNE1-223ENST00000475146 SLC6A20Q9NP91 592 aa23.05■■□□□ 1.28
CPNE1-223ENST00000475146 MRPS30Q9NP92 439 aaKnown RBP23.05■■□□□ 1.28
CPNE1-223ENST00000475146 MOCS1Q9NZB8 636 aa23.05■■□□□ 1.28
CPNE1-223ENST00000475146 VWA7Q9Y334 891 aa23.05■■□□□ 1.28
CPNE1-223ENST00000475146 PSAT1Q9Y617 370 aa23.05■■□□□ 1.28
CPNE1-223ENST00000475146 ATRXP46100 2492 aa23.05■■□□□ 1.28
CPNE1-223ENST00000475146 NRP2O60462 931 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 CTSVO60911 334 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 CCNDBP1O95273 360 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 RECKO95980 971 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 C8GP07360 202 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 FDXRP22570 491 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 PGGT1BP53609 377 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 YBX1P67809 324 aaKnown RBP23.04■■□□□ 1.28
CPNE1-223ENST00000475146 CBLBQ13191 982 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 SP140Q13342 867 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 IL10RAQ13651 578 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 NCF4Q15080 339 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 THEMIS2Q5TEJ8 643 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 ZNF385CQ66K41 422 aaPredicted RBP23.04■■□□□ 1.28
CPNE1-223ENST00000475146 MCOLN3Q8TDD5 553 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 DLG3Q92796 817 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 OLFM1Q99784 485 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 FAM117AQ9C073 453 aa23.04■■□□□ 1.28
CPNE1-223ENST00000475146 ADNPQ9H2P0 1102 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms