RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 IRAK4Q9NWZ3 460 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 SMARCAL1Q9NZC9 954 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 OR6C2Q9NZP2 312 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 SEC14L3Q9UDX4 400 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 MAU2Q9Y6X3 613 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 ABCA4P78363 2273 aa8.91□□□□□ -0.98
VCL-204ENST00000472585 LOC105369274A0A096LPK9 316 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 LOC102723532A0A0G2JNH3 316 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 CFAP99D6REC4 459 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 LIN7AO14910 233 aaPredicted RBP8.9□□□□□ -0.98
VCL-204ENST00000472585 DSCR3O14972 297 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 AKR1B10O60218 316 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 ANXA9O76027 345 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 ZRANB2O95218 330 aaKnown RBP eCLIP8.9□□□□□ -0.98
VCL-204ENST00000472585 CRTAMO95727 393 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 AP2A1O95782 977 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 MBD3O95983 291 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 CRYABP02511 175 aaKnown RBP8.9□□□□□ -0.98
VCL-204ENST00000472585 UQCRHP07919 91 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 PSMA3P25788 255 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 PKLRP30613 574 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 SOX11P35716 441 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 KIR3DL1P43629 444 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 TNFSF10P50591 281 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 PPP2R2AP63151 447 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 SNRPNP63162 240 aaKnown RBP8.9□□□□□ -0.98
VCL-204ENST00000472585 ADORA2A-AS1P86434 159 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 KLC1Q07866 573 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 TUBB8Q3ZCM7 444 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 FRMPD2BQ6IN97 320 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 CAVIN1Q6NZI2 390 aaKnown RBP8.9□□□□□ -0.98
VCL-204ENST00000472585 AADACL2Q6P093 401 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 FIGLAQ6QHK4 219 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 TAX1BP1Q86VP1 789 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 RHOT2Q8IXI1 618 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 PRSS58Q8IYP2 241 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 KATNAL2Q8IYT4 538 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 RCOR2Q8IZ40 523 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 OR4N4Q8N0Y3 316 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 ACTL9Q8TC94 416 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 LKAAEAR1Q8TD35 194 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 HEXDCQ8WVB3 486 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 ELMO1Q92556 727 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 IQCDQ96DY2 449 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 SPOCK3Q9BQ16 436 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 C19orf43Q9BQ61 176 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 TBL1YQ9BQ87 522 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 NHEJ1Q9H9Q4 299 aaPredicted RBP8.9□□□□□ -0.98
VCL-204ENST00000472585 ZNF160Q9HCG1 818 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 GPAMQ9HCL2 828 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 PRDM9Q9NQV7 894 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 POLG2Q9UHN1 485 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 PCDHGB6Q9Y5F9 930 aa8.9□□□□□ -0.98
VCL-204ENST00000472585 TRAV17A0A0B4J275 112 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 FAM221AA4D161 298 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 FITM1A5D6W6 292 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 IQCF5A8MTL0 148 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 H7C0C1 242 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 APOC4-APOC2K7ER74 178 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 FFAR3O14843 346 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 GPR42O15529 346 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 ZNHIT1O43257 154 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 PSTPIP1O43586 416 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 SPOPO43791 374 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 AP2A2O94973 939 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 METTL18O95568 372 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 APOC2P02655 101 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 PRR35P0CG20 571 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 COX6A1P12074 109 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 CD9P21926 228 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 CCR7P32248 378 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 FOXN2P32314 431 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 TNNT3P45378 269 aaPredicted RBP8.89□□□□□ -0.99
VCL-204ENST00000472585 ATP5OP48047 213 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 ARSFP54793 590 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 CSE1LP55060 971 aaKnown RBP8.89□□□□□ -0.99
VCL-204ENST00000472585 KIR2DS3Q14952 304 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 CCSMST1Q4G0I0 132 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 WASHC2DQ5SRD0 308 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 MEX3BQ6ZN04 569 aaKnown RBP8.89□□□□□ -0.99
VCL-204ENST00000472585 ARHGEF18Q6ZSZ5 1173 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 RETREG3Q86VR2 466 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 SIRT6Q8N6T7 355 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 CHDHQ8NE62 594 aaPredicted RBP8.89□□□□□ -0.99
VCL-204ENST00000472585 STT3BQ8TCJ2 826 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 BRIX1Q8TDN6 353 aaKnown RBP8.89□□□□□ -0.99
VCL-204ENST00000472585 ADAMTS18Q8TE60 1221 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 HAS2Q92819 552 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 GBP4Q96PP9 640 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 SEMA3GQ9NS98 782 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 PTGFRNQ9P2B2 879 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 IMPACTQ9P2X3 320 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 AAR2Q9Y312 384 aaKnown RBP8.89□□□□□ -0.99
VCL-204ENST00000472585 PRRC2AP48634 2157 aaKnown RBP8.89□□□□□ -0.99
VCL-204ENST00000472585 GTF3C1Q12789 2109 aa8.89□□□□□ -0.99
VCL-204ENST00000472585 SYCE3A1L190 88 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 CCDC162PA2VCL2 907 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 MROH6A6NGR9 719 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 SLC19A2O60779 497 aa8.88□□□□□ -0.99
VCL-204ENST00000472585 GPC4O75487 556 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms