RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 LACTB2Q53H82 288 aaPredicted RBP4.68□□□□□ -1.66
LSM5-209ENST00000468872 DCAF10Q5QP82 559 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 C11orf88Q6PI97 169 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 OTOAQ7RTW8 1153 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 PIWIL3Q7Z3Z3 882 aaKnown RBP4.68□□□□□ -1.66
LSM5-209ENST00000468872 MMD2Q8IY49 270 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 METTL27Q8N6F8 245 aaPredicted RBP4.68□□□□□ -1.66
LSM5-209ENST00000468872 DMBX1Q8NFW5 382 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 PIGBQ92521 554 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 RAD54LQ92698 747 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 ALG14Q96F25 216 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 HES6Q96HZ4 224 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 PSD2Q9BQI7 771 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 MLPHQ9BV36 600 aaPredicted RBP4.68□□□□□ -1.66
LSM5-209ENST00000468872 LMAN1LQ9HAT1 526 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 UPF2Q9HAU5 1272 aaKnown RBP4.68□□□□□ -1.66
LSM5-209ENST00000468872 TAAR2Q9P1P5 351 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 ZDHHC2Q9UIJ5 367 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 TRIM17Q9Y577 477 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 ATAD2BQ9ULI0 1458 aa4.68□□□□□ -1.66
LSM5-209ENST00000468872 BUB3O43684 328 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 VIMP08670 466 aaKnown RBP4.67□□□□□ -1.66
LSM5-209ENST00000468872 IRF2P14316 349 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 AMD1P17707 334 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 CA4P22748 312 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 CD27P26842 260 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 TIA1P31483 386 aaKnown RBP eCLIP4.67□□□□□ -1.66
LSM5-209ENST00000468872 TCF7P36402 384 aaPredicted RBP4.67□□□□□ -1.66
LSM5-209ENST00000468872 WNT5AP41221 380 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 DMP1Q13316 513 aaPredicted RBP4.67□□□□□ -1.66
LSM5-209ENST00000468872 TNK1Q13470 666 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 MEP1BQ16820 701 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 CTU2Q2VPK5 515 aaKnown RBP4.67□□□□□ -1.66
LSM5-209ENST00000468872 KRTAP24-1Q3LI83 254 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 FAM174BQ3ZCQ3 159 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 CYP4A22Q5TCH4 519 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 IQCA1Q86XH1 822 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 DNAJC22Q8N4W6 341 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 RFLNBQ8N5W9 214 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 NHLRC2Q8NBF2 726 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.67□□□□□ -1.66
LSM5-209ENST00000468872 PROX1Q92786 737 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 LAT2Q9GZY6 243 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 ZFP57Q9NU63 452 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 SPHK1Q9NYA1 384 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 DONSONQ9NYP3 566 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 COQ3Q9NZJ6 369 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 CACNG4Q9UBN1 327 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 ACAD8Q9UKU7 415 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 URB2Q14146 1524 aaKnown RBP4.67□□□□□ -1.66
LSM5-209ENST00000468872 MYO15BQ96JP2 1530 aa4.67□□□□□ -1.66
LSM5-209ENST00000468872 A0A0U1RQK1 487 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 ZNF320A2RRD8 509 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 DUXAA6NLW8 204 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 IFIT3O14879 490 aaKnown RBP4.66□□□□□ -1.66
LSM5-209ENST00000468872 KRT36O76013 467 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 TSHBP01222 138 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 F7P08709 466 aaPredicted RBP4.66□□□□□ -1.66
LSM5-209ENST00000468872 LBPP18428 481 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 SP100P23497 879 aaPredicted RBP4.66□□□□□ -1.66
LSM5-209ENST00000468872 HSD17B3P37058 310 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 DCTP40126 519 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 RGS7P49802 495 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 MTCP1P56278 107 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 YWHAHQ04917 246 aaPredicted RBP4.66□□□□□ -1.66
LSM5-209ENST00000468872 ARL16Q0P5N6 197 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 TAF10Q12962 218 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 SLMAPQ14BN4 828 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 ZRSR1Q15695 479 aaKnown RBP4.66□□□□□ -1.66
LSM5-209ENST00000468872 TAZQ16635 292 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 PTGISQ16647 500 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 ODF4Q2M2E3 257 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 TYSND1Q2T9J0 566 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 LRRC73Q5JTD7 316 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 TXNRD3NBQ6F5E7 133 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 SLC27A1Q6PCB7 646 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 ZNF843Q8N446 348 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 MAPKAPK5-AS1Q8N8E1 139 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 RASGEF1AQ8N9B8 481 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 OR4K1Q8NGD4 311 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 FIBINQ8TAL6 211 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 DNASE1L2Q92874 299 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 FAM71F1Q96KD3 344 aaPredicted RBP4.66□□□□□ -1.66
LSM5-209ENST00000468872 INPP4AQ96PE3 977 aaPredicted RBP4.66□□□□□ -1.66
LSM5-209ENST00000468872 TRMT61BQ9BVS5 477 aaKnown RBP4.66□□□□□ -1.66
LSM5-209ENST00000468872 PRRG4Q9BZD6 226 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 SDR39U1Q9NRG7 319 aaPredicted RBP4.66□□□□□ -1.66
LSM5-209ENST00000468872 ERAP1Q9NZ08 941 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 TXNDC16Q9P2K2 825 aa4.66□□□□□ -1.66
LSM5-209ENST00000468872 EIF4G3O43432 1585 aaKnown RBP4.65□□□□□ -1.66
LSM5-209ENST00000468872 TRAV24A0A0B4J272 114 aa4.65□□□□□ -1.67
LSM5-209ENST00000468872 LOC101059948A0A1B0GTJ6 334 aa4.65□□□□□ -1.67
LSM5-209ENST00000468872 A0A1W2PN81 502 aa4.65□□□□□ -1.67
LSM5-209ENST00000468872 SLC30A4O14863 429 aa4.65□□□□□ -1.67
LSM5-209ENST00000468872 STX6O43752 255 aa4.65□□□□□ -1.67
LSM5-209ENST00000468872 SELENOFO60613 162 aa4.65□□□□□ -1.67
LSM5-209ENST00000468872 FCGR3BO75015 233 aa4.65□□□□□ -1.67
LSM5-209ENST00000468872 PIGNO95427 931 aa4.65□□□□□ -1.67
LSM5-209ENST00000468872 SPP1P10451 314 aa4.65□□□□□ -1.67
LSM5-209ENST00000468872 PSMB4P28070 264 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms