RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 PIKFYVEQ9Y2I7 2098 aa11.08□□□□□ -0.63
CDHR3-205ENST00000468143 A0A0J9YVX5 310 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 MYO1CO00159 1063 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 SMAPO00193 183 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 RAD51CO43502 376 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 ZBTB14O43829 449 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 CTSVO60911 334 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 SLC16A8O95907 504 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 RAB40ALP0C0E4 278 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 SFTPCP11686 197 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 RPA3P35244 121 aaPredicted RBP11.08□□□□□ -0.64
CDHR3-205ENST00000468143 PNLIPRP1P54315 467 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 FOXL2P58012 376 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 VSX2P58304 361 aaPredicted RBP11.08□□□□□ -0.64
CDHR3-205ENST00000468143 CHAF1BQ13112 559 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 UGT8Q16880 541 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 ZC3H12BQ5HYM0 836 aaKnown RBP11.08□□□□□ -0.64
CDHR3-205ENST00000468143 ZNF385CQ66K41 422 aaPredicted RBP11.08□□□□□ -0.64
CDHR3-205ENST00000468143 FRMPD2BQ6IN97 320 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 UGT3A1Q6NUS8 523 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 TLDC1Q6P9B6 456 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 PAQR3Q6TCH7 311 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 FAM198BQ6UWH4 519 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 CAPN12Q6ZSI9 719 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 TTLL10Q6ZVT0 673 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 NEK10Q6ZWH5 1172 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 UBE2R2Q712K3 238 aaPredicted RBP11.08□□□□□ -0.64
CDHR3-205ENST00000468143 SYVN1Q86TM6 617 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 TMEM151BQ8IW70 566 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 GPATCH11Q8N954 259 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 GABPB2Q8TAK5 448 aaPredicted RBP11.08□□□□□ -0.64
CDHR3-205ENST00000468143 ZNF480Q8WV37 535 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 SMPDL3AQ92484 453 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 ZUFSPQ96AP4 578 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 DPH7Q9BTV6 452 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 NDC1Q9BTX1 674 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 NLNQ9BYT8 704 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 FAM117AQ9C073 453 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 SLC25A18Q9H1K4 315 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 ADNPQ9H2P0 1102 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 TXLNGQ9NUQ3 528 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 STOX2Q9P2F5 926 aaPredicted RBP11.08□□□□□ -0.64
CDHR3-205ENST00000468143 KLHL42Q9P2K6 505 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 NDOR1Q9UHB4 597 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 ADAMTS6Q9UKP5 1117 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 TCFL5Q9UL49 500 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 SNX7Q9UNH6 387 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 MAN2B2Q9Y2E5 1009 aa11.08□□□□□ -0.64
CDHR3-205ENST00000468143 LOC105369274A0A096LPK9 316 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 LOC102723532A0A0G2JNH3 316 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 FAM187AA6NFU0 413 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 ARGFXA6NJG6 315 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 TARM1B6A8C7 271 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 GFYI3L273 518 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 K7EM74 188 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 PIAS1O75925 651 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 DNAJB5O75953 348 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 RECKO95980 971 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 EIF2S1P05198 315 aaKnown RBP11.07□□□□□ -0.64
CDHR3-205ENST00000468143 ERGP11308 486 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 ENO3P13929 434 aaPredicted RBP11.07□□□□□ -0.64
CDHR3-205ENST00000468143 PLA2G2AP14555 144 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 NR1D1P20393 614 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 SAT1P21673 171 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 CMPK1P30085 196 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 DCDP81605 110 aaKnown RBP11.07□□□□□ -0.64
CDHR3-205ENST00000468143 NCF4Q15080 339 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 COLEC12Q5KU26 742 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 WASHC2DQ5SRD0 308 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 HECTD2Q5U5R9 776 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 RHBDD2Q6NTF9 364 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 FBXO42Q6P3S6 717 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 KIAA0408Q6ZU52 694 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 PRICKLE2Q7Z3G6 844 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 CNTN4Q8IWV2 1026 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 ZBED8Q8IZ13 594 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 OR4N4Q8N0Y3 316 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 METTL27Q8N6F8 245 aaPredicted RBP11.07□□□□□ -0.64
CDHR3-205ENST00000468143 DLG3Q92796 817 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 LRRC39Q96DD0 335 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 LINGO1Q96FE5 620 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 GBP5Q96PP8 586 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 SELENOSQ9BQE4 189 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 ERP44Q9BS26 406 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 TRIM55Q9BYV6 548 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 SLC6A20Q9NP91 592 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 MRPS30Q9NP92 439 aaKnown RBP11.07□□□□□ -0.64
CDHR3-205ENST00000468143 TAS2R13Q9NYV9 303 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 IFT80Q9P2H3 777 aaPredicted RBP11.07□□□□□ -0.64
CDHR3-205ENST00000468143 TAC3Q9UHF0 121 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 GPN3Q9UHW5 284 aaPredicted RBP11.07□□□□□ -0.64
CDHR3-205ENST00000468143 TLK1Q9UKI8 766 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 HEMK1Q9Y5R4 338 aaPredicted RBP11.07□□□□□ -0.64
CDHR3-205ENST00000468143 PSAT1Q9Y617 370 aa11.07□□□□□ -0.64
CDHR3-205ENST00000468143 C9J4A7 227 aa11.06□□□□□ -0.64
CDHR3-205ENST00000468143 E7ENX8 843 aa11.06□□□□□ -0.64
CDHR3-205ENST00000468143 SLC28A2O43868 658 aa11.06□□□□□ -0.64
CDHR3-205ENST00000468143 OTX2P32243 289 aa11.06□□□□□ -0.64
CDHR3-205ENST00000468143 SKIV2L2P42285 1042 aaKnown RBP11.06□□□□□ -0.64
CDHR3-205ENST00000468143 RGS4P49798 205 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms