RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 SLC35G6P0C7Q6 338 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 CDKN2DP55273 166 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 CNKSR3Q6P9H4 555 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 KLHL35Q6PF15 583 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 RANBP10Q6VN20 620 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 FAM98AQ8NCA5 519 aaKnown RBP14.41□□□□□ -0.1
PTPRU-205ENST00000460170 PYURFQ96I23 114 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 C12orf66Q96MD2 445 aa14.41□□□□□ -0.1
PTPRU-205ENST00000460170 TUBA8Q9NY65 449 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-205ENST00000460170 RCVRNP35243 200 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 CLCN4P51793 760 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 GPRC6AQ5T6X5 926 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 BEND5Q7L4P6 421 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 PIGXQ8TBF5 258 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 MAGEE1Q9HCI5 957 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 GABRQQ9UN88 632 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 MBLAC1A4D2B0 266 aaPredicted RBP14.4□□□□□ -0.1
PTPRU-205ENST00000460170 NT5EP21589 574 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 STXBP1P61764 594 aaKnown RBP14.4□□□□□ -0.1
PTPRU-205ENST00000460170 CGB2Q6NT52 195 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 PLET1Q6UQ28 207 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 DNASE1L2Q92874 299 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 SLC45A3Q96JT2 553 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 FAM120CQ9NX05 1096 aaKnown RBP14.4□□□□□ -0.1
PTPRU-205ENST00000460170 ABHD14A-ACY1A0A1B0GW23 586 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 UPK3BL1B0FP48 263 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 UPK3BL2E5RIL1 263 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 G3V2L1 256 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 HSD17B2P37059 387 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 NFATC2Q13469 925 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 AGTRAPQ6RW13 159 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 ZNF783Q6ZMS7 281 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 LGI4Q8N135 537 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 CYB5D2Q8WUJ1 264 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 FBXL20Q96IG2 436 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 POLR2J3Q9H1A7 115 aaKnown RBP14.4□□□□□ -0.1
PTPRU-205ENST00000460170 RSPH9Q9H1X1 276 aaPredicted RBP14.4□□□□□ -0.1
PTPRU-205ENST00000460170 SPATA7Q9P0W8 599 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 LOC100130705A0A1B0GUX0 176 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 EFCAB9A8MZ26 197 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 SLC22A1O15245 554 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 SOCS5O75159 536 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 SOD2P04179 222 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 PRAMEF14Q5SWL7 426 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 PRAMEF13Q5VWM6 474 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 VITQ6UXI7 678 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 CMTM7Q96FZ5 175 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 DIRAS2Q96HU8 199 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 RPF2Q9H7B2 306 aaKnown RBP14.4□□□□□ -0.1
PTPRU-205ENST00000460170 ZCCHC3Q9NUD5 404 aaKnown RBP14.4□□□□□ -0.1
PTPRU-205ENST00000460170 N6AMT1Q9Y5N5 214 aa14.4□□□□□ -0.1
PTPRU-205ENST00000460170 CD36P16671 472 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 FPR1P21462 350 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 C1QTNF8P60827 252 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 CCDC157Q569K6 752 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 SYVN1Q86TM6 617 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 ADGRG2Q8IZP9 1017 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 TPT1P8Q9HAU6 139 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 OPN1SWP03999 348 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 ERVK-21P61565 698 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 ATAT1Q5SQI0 421 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 KHDRBS2Q5VWX1 349 aaKnown RBP14.39□□□□□ -0.11
PTPRU-205ENST00000460170 NUDT13Q86X67 352 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 RFKQ969G6 155 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 FCRL4Q96PJ5 515 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 CCM2LQ9NUG4 571 aaPredicted RBP14.39□□□□□ -0.11
PTPRU-205ENST00000460170 B4GALT6Q9UBX8 382 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 H3BNH8 94 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 INPPL1O15357 1258 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 FDXRP22570 491 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 PIK3CBP42338 1070 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 GANABQ14697 944 aaKnown RBP14.39□□□□□ -0.11
PTPRU-205ENST00000460170 PLEKHG6Q3KR16 790 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 IQCCQ4KMZ1 466 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 USP30Q70CQ3 517 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 TRIB2Q92519 343 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 WDR6Q9NNW5 1121 aaKnown RBP14.39□□□□□ -0.11
PTPRU-205ENST00000460170 TDP1Q9NUW8 608 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 TVP23BQ9NYZ1 205 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 PRSS51A0A1B0GVH4 220 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 TPST2O60704 377 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 SLC25A12O75746 678 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 OR5F1O95221 314 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 IGFBP4P22692 258 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 GCAP28676 217 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 GKP32189 559 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 CRISP3P54108 245 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 DMPKQ09013 629 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 TARDBPQ13148 414 aaKnown RBP eCLIP14.39□□□□□ -0.11
PTPRU-205ENST00000460170 MYBPC3Q14896 1274 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 UTS2BQ765I0 119 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 SLC15A3Q8IY34 581 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 ARNTL2Q8WYA1 636 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 AURKBQ96GD4 344 aaPredicted RBP14.39□□□□□ -0.11
PTPRU-205ENST00000460170 DNAAF2Q9NVR5 837 aaKnown RBP14.39□□□□□ -0.11
PTPRU-205ENST00000460170 OAZ2O95190 189 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 KHKP50053 298 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 CCR8P51685 355 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 ARSFP54793 590 aa14.39□□□□□ -0.11
PTPRU-205ENST00000460170 DSTNP60981 165 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms