RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 NIPSNAP2O75323 286 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 MATN4O95460 622 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 GP1BBP13224 206 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 MMP11P24347 488 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 PSMB5P28074 263 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 FMO4P31512 558 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 CXCR5P32302 372 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 FOXL2P58012 376 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 CES3Q6UWW8 571 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 COX15Q7KZN9 410 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 OVCH1Q7RTY7 1134 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 LRRC8AQ8IWT6 810 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 MFRPQ9BY79 579 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 SLC29A3Q9BZD2 475 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 LUZP4Q9P127 313 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 VPS9D1Q9Y2B5 631 aa21.82■■□□□ 1.08
PTPN4-207ENST00000460162 SPTBN1Q01082 2364 aaKnown RBP21.81■■□□□ 1.08
PTPN4-207ENST00000460162 GOLGA8KD6RF30 607 aa21.81■■□□□ 1.08
PTPN4-207ENST00000460162 GOLGA8TH3BQL2 631 aa21.81■■□□□ 1.08
PTPN4-207ENST00000460162 SRPX2O60687 465 aaPredicted RBP21.81■■□□□ 1.08
PTPN4-207ENST00000460162 CTSVO60911 334 aa21.81■■□□□ 1.08
PTPN4-207ENST00000460162 ERGP11308 486 aa21.81■■□□□ 1.08
PTPN4-207ENST00000460162 MCM3P25205 808 aa21.81■■□□□ 1.08
PTPN4-207ENST00000460162 CCZ1BP86790 482 aa21.81■■□□□ 1.08
PTPN4-207ENST00000460162 CCZ1P86791 482 aaPredicted RBP21.81■■□□□ 1.08
PTPN4-207ENST00000460162 GPS1Q13098 491 aa21.81■■□□□ 1.08
PTPN4-207ENST00000460162 PRR30Q53SZ7 412 aaPredicted RBP21.81■■□□□ 1.08
PTPN4-207ENST00000460162 IGFL3Q6UXB1 125 aa21.81■■□□□ 1.08
PTPN4-207ENST00000460162 RNF44Q7L0R7 432 aa21.81■■□□□ 1.08
PTPN4-207ENST00000460162 OR2A1Q8NGT9 310 aa21.81■■□□□ 1.08
PTPN4-207ENST00000460162 TM9SF4Q92544 642 aa21.81■■□□□ 1.08
PTPN4-207ENST00000460162 SPSB2Q99619 263 aa21.81■■□□□ 1.08
PTPN4-207ENST00000460162 MIPEPQ99797 713 aa21.81■■□□□ 1.08
PTPN4-207ENST00000460162 IL1RAPL1Q9NZN1 696 aa21.81■■□□□ 1.08
PTPN4-207ENST00000460162 SAMD15Q9P1V8 674 aa21.81■■□□□ 1.08
PTPN4-207ENST00000460162 A0A1W2PPV9 198 aa21.8■■□□□ 1.08
PTPN4-207ENST00000460162 KRT87PA6NCN2 255 aa21.8■■□□□ 1.08
PTPN4-207ENST00000460162 NRDCO43847 1150 aa21.8■■□□□ 1.08
PTPN4-207ENST00000460162 VPS41P49754 854 aa21.8■■□□□ 1.08
PTPN4-207ENST00000460162 AIMP2Q13155 320 aaKnown RBP21.8■■□□□ 1.08
PTPN4-207ENST00000460162 TRIP13Q15645 432 aaPredicted RBP21.8■■□□□ 1.08
PTPN4-207ENST00000460162 NKG7Q16617 165 aa21.8■■□□□ 1.08
PTPN4-207ENST00000460162 FAM214AQ32MH5 1076 aa21.8■■□□□ 1.08
PTPN4-207ENST00000460162 FHL5Q5TD97 284 aa21.8■■□□□ 1.08
PTPN4-207ENST00000460162 CILP2Q8IUL8 1156 aa21.8■■□□□ 1.08
PTPN4-207ENST00000460162 IQCKQ8N0W5 287 aa21.8■■□□□ 1.08
PTPN4-207ENST00000460162 PSMG3-AS1Q96PY0 264 aa21.8■■□□□ 1.08
PTPN4-207ENST00000460162 ZNF552Q9H707 407 aaPredicted RBP21.8■■□□□ 1.08
PTPN4-207ENST00000460162 ATP13A2Q9NQ11 1180 aa21.8■■□□□ 1.08
PTPN4-207ENST00000460162 INTS10Q9NVR2 710 aaKnown RBP21.8■■□□□ 1.08
PTPN4-207ENST00000460162 B3GNT3Q9Y2A9 372 aa21.8■■□□□ 1.08
PTPN4-207ENST00000460162 CRYL1Q9Y2S2 319 aa21.8■■□□□ 1.08
PTPN4-207ENST00000460162 ESPL1Q14674 2120 aa21.79■■□□□ 1.08
PTPN4-207ENST00000460162 E5RI56 91 aa21.79■■□□□ 1.08
PTPN4-207ENST00000460162 MLNP12872 115 aa21.79■■□□□ 1.08
PTPN4-207ENST00000460162 PKMP14618 531 aaKnown RBP21.79■■□□□ 1.08
PTPN4-207ENST00000460162 CHRM3P20309 590 aa21.79■■□□□ 1.08
PTPN4-207ENST00000460162 VSX2P58304 361 aaPredicted RBP21.79■■□□□ 1.08
PTPN4-207ENST00000460162 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.79■■□□□ 1.08
PTPN4-207ENST00000460162 CASC4Q6P4E1 433 aa21.79■■□□□ 1.08
PTPN4-207ENST00000460162 CENPUQ71F23 418 aa21.79■■□□□ 1.08
PTPN4-207ENST00000460162 TMEM151BQ8IW70 566 aa21.79■■□□□ 1.08
PTPN4-207ENST00000460162 FAM136AQ96C01 138 aa21.79■■□□□ 1.08
PTPN4-207ENST00000460162 FAM114A2Q9NRY5 505 aa21.79■■□□□ 1.08
PTPN4-207ENST00000460162 CTSFQ9UBX1 484 aa21.79■■□□□ 1.08
PTPN4-207ENST00000460162 TSR3Q9UJK0 312 aaKnown RBP21.79■■□□□ 1.08
PTPN4-207ENST00000460162 CDC23Q9UJX2 597 aa21.79■■□□□ 1.08
PTPN4-207ENST00000460162 FBXL4Q9UKA2 621 aa21.79■■□□□ 1.08
PTPN4-207ENST00000460162 PPP2R2CQ9Y2T4 447 aa21.79■■□□□ 1.08
PTPN4-207ENST00000460162 FAM237BA0A1B0GVD1 139 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 BLACEA4D250 179 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 OR2A25A4D2G3 310 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 ARHGEF33A8MVX0 844 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 MYO1CO00159 1063 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 PHF2O75151 1096 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 AVILO75366 819 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 PSIP1O75475 530 aaKnown RBP21.78■■□□□ 1.08
PTPN4-207ENST00000460162 AGFG2O95081 481 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 KRT14P02533 472 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 CMPK1P30085 196 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 ARHGAP19Q14CB8 494 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 ANKRD20A4Q4UJ75 823 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 WASHC2DQ5SRD0 308 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 ANKRD22Q5VYY1 191 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 ZNF470Q6ECI4 717 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 NEPROQ6NW34 567 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 CAND1Q86VP6 1230 aaKnown RBP21.78■■□□□ 1.08
PTPN4-207ENST00000460162 RASGEF1CQ8N431 466 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 OR9A1PQ8NGU1 263 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 ZFYVE21Q9BQ24 234 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 XAB2Q9HCS7 855 aaKnown RBP21.78■■□□□ 1.08
PTPN4-207ENST00000460162 SLC6A20Q9NP91 592 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 HS3ST3B1Q9Y662 390 aa21.78■■□□□ 1.08
PTPN4-207ENST00000460162 A0A0J9YVX5 310 aa21.77■■□□□ 1.08
PTPN4-207ENST00000460162 HYKKA2RU49 373 aa21.77■■□□□ 1.08
PTPN4-207ENST00000460162 SOCS6O14544 535 aa21.77■■□□□ 1.08
PTPN4-207ENST00000460162 CATP04040 527 aaKnown RBP21.77■■□□□ 1.08
PTPN4-207ENST00000460162 TERF1P54274 439 aa21.77■■□□□ 1.08
PTPN4-207ENST00000460162 DHX34Q14147 1143 aaKnown RBP21.77■■□□□ 1.08
PTPN4-207ENST00000460162 FASTKQ14296 549 aaKnown RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms