RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 TRMOQ9BU70 441 aa8.45□□□□□ -1.06
RIF1-208ENST00000457745 ACAT2Q9BWD1 397 aa8.45□□□□□ -1.06
RIF1-208ENST00000457745 AICDAQ9GZX7 198 aa8.45□□□□□ -1.06
RIF1-208ENST00000457745 TWSG1Q9GZX9 223 aa8.45□□□□□ -1.06
RIF1-208ENST00000457745 DUSP15Q9H1R2 295 aaPredicted RBP8.45□□□□□ -1.06
RIF1-208ENST00000457745 SLC32A1Q9H598 525 aa8.45□□□□□ -1.06
RIF1-208ENST00000457745 AKTIPQ9H8T0 292 aa8.45□□□□□ -1.06
RIF1-208ENST00000457745 TAAR2Q9P1P5 351 aa8.45□□□□□ -1.06
RIF1-208ENST00000457745 TMCO1Q9UM00 188 aa8.45□□□□□ -1.06
RIF1-208ENST00000457745 TTC28Q96AY4 2481 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 BTN3A3O00478 584 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 EBAG9O00559 213 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 PRAMEF10O60809 474 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 SH3BGRLO75368 114 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 RSL1D1O76021 490 aaKnown RBP8.44□□□□□ -1.06
RIF1-208ENST00000457745 WFS1O76024 890 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 TBX6O95947 436 aaPredicted RBP8.44□□□□□ -1.06
RIF1-208ENST00000457745 PDYNP01213 254 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 STATHP02808 62 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 GIMD1P0DJR0 217 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 CDH1P12830 882 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 IDSP22304 550 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 CD38P28907 300 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 LSSP48449 732 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 CCNG1P51959 295 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 DIO3P55073 304 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 PKNOX1P55347 436 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 NME5P56597 212 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 UBE2IP63279 158 aaKnown RBP8.44□□□□□ -1.06
RIF1-208ENST00000457745 BNIP1Q12981 228 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 CHIT1Q13231 466 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 E2F2Q14209 437 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 ZRSR2Q15696 482 aaKnown RBP8.44□□□□□ -1.06
RIF1-208ENST00000457745 CPSF6Q16630 551 aaKnown RBP eCLIP8.44□□□□□ -1.06
RIF1-208ENST00000457745 CYP2A13Q16696 494 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 ZNF423Q2M1K9 1284 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 PRRT3Q5FWE3 981 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 SPDYAQ5MJ70 313 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 ABRAXAS1Q6UWZ7 409 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 GK5Q6ZS86 529 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 DGLUCYQ7Z3D6 616 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 MILR1Q7Z6M3 343 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 TRIM73Q86UV7 250 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 WDR5BQ86VZ2 330 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 SHISA5Q8N114 240 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 KIF2BQ8N4N8 673 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 FBXL6Q8N531 539 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 L3MBTL4Q8NA19 623 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 DTWD2Q8NBA8 298 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 CADM4Q8NFZ8 388 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 DNASE2BQ8WZ79 361 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 USP7Q93009 1102 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 SLC7A6OSQ96CW6 309 aaPredicted RBP8.44□□□□□ -1.06
RIF1-208ENST00000457745 MTFMTQ96DP5 389 aaKnown RBP8.44□□□□□ -1.06
RIF1-208ENST00000457745 TEX37Q96LM6 180 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 MIPEPQ99797 713 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 C1orf50Q9BV19 199 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 NTMT1Q9BV86 223 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 ACPTQ9BZG2 426 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 ACTL8Q9H568 366 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 SLC6A20Q9NP91 592 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 TCF7L2Q9NQB0 619 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 EVA1BQ9NVM1 165 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 TAC3Q9UHF0 121 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 TRPS1Q9UHF7 1281 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 ZFP69BQ9UJL9 534 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 PCOLCE2Q9UKZ9 415 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 ACSL5Q9ULC5 683 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 ZNF490Q9ULM2 529 aaPredicted RBP8.44□□□□□ -1.06
RIF1-208ENST00000457745 SLC12A4Q9UP95 1085 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 TNPO3Q9Y5L0 923 aaKnown RBP8.44□□□□□ -1.06
RIF1-208ENST00000457745 COPG1Q9Y678 874 aaKnown RBP8.44□□□□□ -1.06
RIF1-208ENST00000457745 BDP1A6H8Y1 2624 aa8.44□□□□□ -1.06
RIF1-208ENST00000457745 ARID1BQ8NFD5 2236 aaPredicted RBP8.44□□□□□ -1.06
RIF1-208ENST00000457745 PATE3B3GLJ2 98 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 C4orf51C9J302 202 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 TLR4O00206 839 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 KLHL18O94889 574 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 MLYCDO95822 493 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 B3GALT4O96024 378 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 HIST1H2AGP0C0S8 130 aaPredicted RBP8.43□□□□□ -1.06
RIF1-208ENST00000457745 UROSP10746 265 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 HGFP14210 728 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 NME1P15531 152 aaKnown RBP8.43□□□□□ -1.06
RIF1-208ENST00000457745 EPB42P16452 691 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 JUNDP17535 347 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 HIST1H2ADP20671 130 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 KELP23276 732 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 MAP4P27816 1152 aaKnown RBP8.43□□□□□ -1.06
RIF1-208ENST00000457745 PIK3R1P27986 724 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 IL12AP29459 219 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 HOXA6P31267 233 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 RACK1P63244 317 aaKnown RBP8.43□□□□□ -1.06
RIF1-208ENST00000457745 BNIP3Q12983 259 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 CDC16Q13042 620 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 KLF10Q13118 480 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 PTK2BQ14289 1009 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 NAA25Q14CX7 972 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 KIF19Q2TAC6 998 aa8.43□□□□□ -1.06
RIF1-208ENST00000457745 PLK5Q496M5 336 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms