RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 FRG1Q14331 258 aaKnown RBP12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 ARHGAP19Q14CB8 494 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 PTCHD3Q3KNS1 767 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 ZNF385CQ66K41 422 aaPredicted RBP12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 UGT3A1Q6NUS8 523 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 TLDC1Q6P9B6 456 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 PAQR3Q6TCH7 311 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 SUSD1Q6UWL2 747 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 SYTL1Q8IYJ3 562 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 ZNF655Q8N720 491 aaPredicted RBP12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 FBXO15Q8NCQ5 510 aaPredicted RBP12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 DLG3Q92796 817 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 MIPEPQ99797 713 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 ACAT2Q9BWD1 397 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 NLNQ9BYT8 704 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 TAS2R13Q9NYV9 303 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 MOCS1Q9NZB8 636 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 GRHL1Q9NZI5 618 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 TRMT6Q9UJA5 497 aaKnown RBP12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 KLK4Q9Y5K2 254 aa12.24□□□□□ -0.45
PRPF40A-203ENST00000448428 MDC1Q14676 2089 aaKnown RBP12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 CDC14CA4D256 554 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 EIF3FO00303 357 aaPredicted RBP12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 ZSCAN9O15535 394 aaPredicted RBP12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 NRP2O60462 931 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 CTSVO60911 334 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 SYF2O95926 243 aaKnown RBP12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 RAB40ALP0C0E4 278 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 AGXTP21549 392 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 HSD17B2P37059 387 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 PNLIPRP1P54315 467 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 POLE2P56282 527 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 MGAT5Q09328 741 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 CALCOCO2Q13137 446 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 ZC3H12BQ5HYM0 836 aaKnown RBP12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 HECTD2Q5U5R9 776 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 C1orf189Q5VU69 101 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 FAM69BQ5VUD6 431 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 RHBDD2Q6NTF9 364 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 UBE2R2Q712K3 238 aaPredicted RBP12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 ZNF572Q7Z3I7 529 aaPredicted RBP12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 ZBED8Q8IZ13 594 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 ENDOVQ8N8Q3 282 aaKnown RBP12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 PPFIBP2Q8ND30 876 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 ZNF480Q8WV37 535 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 APOBEC4Q8WW27 367 aaKnown RBP12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 SMPDL3AQ92484 453 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 C16orf45Q96MC5 204 aaPredicted RBP12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 DPH2Q9BQC3 489 aaPredicted RBP12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 DPH7Q9BTV6 452 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 STARD5Q9NSY2 213 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 IRAK4Q9NWZ3 460 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 GEMIN8Q9NWZ8 242 aaKnown RBP12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 DHCR7Q9UBM7 475 aaKnown RBP12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 ADAMTS6Q9UKP5 1117 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 VWA7Q9Y334 891 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 PSAT1Q9Y617 370 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 KCNMB2Q9Y691 235 aa12.23□□□□□ -0.45
PRPF40A-203ENST00000448428 E7ENX8 843 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 SFTPCP11686 197 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 CMPK1P30085 196 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 RPA3P35244 121 aaPredicted RBP12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 GCGRP47871 477 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 RGS4P49798 205 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 NFKB2Q00653 900 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 TAP2Q03519 686 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 TSTA3Q13630 321 aaPredicted RBP12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 TRADDQ15628 312 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 UGT8Q16880 541 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 FBXO42Q6P3S6 717 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 FAM198BQ6UWH4 519 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 SYVN1Q86TM6 617 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 LRRC56Q8IYG6 542 aaPredicted RBP12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 GPATCH11Q8N954 259 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 PYROXD1Q8WU10 500 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 GBP5Q96PP8 586 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 OLFM1Q99784 485 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 NDC1Q9BTX1 674 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 FAM117AQ9C073 453 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 ADNPQ9H2P0 1102 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 SLC6A20Q9NP91 592 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 MRPS30Q9NP92 439 aaKnown RBP12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 ZFATQ9P243 1243 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 CDC23Q9UJX2 597 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 TCFL5Q9UL49 500 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 PDE10AQ9Y233 779 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 POLHQ9Y253 713 aa12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 UTP11Q9Y3A2 253 aaKnown RBP12.22□□□□□ -0.45
PRPF40A-203ENST00000448428 LOC105369274A0A096LPK9 316 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 IGKV1-8A0A0C4DH67 115 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 LOC102723532A0A0G2JNH3 316 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 A0A0J9YVX5 310 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 OR2A25A4D2G3 310 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 ZNF839A8K0R7 811 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 SRPX2O60687 465 aaPredicted RBP12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 PIAS1O75925 651 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 URI1O94763 535 aaPredicted RBP12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 TSPAN12O95859 305 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 ATXN8OSP0DMR3 200 aa12.21□□□□□ -0.45
PRPF40A-203ENST00000448428 ALAS2P22557 587 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms