RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 ZNF701Q9NV72 531 aaPredicted RBP3.15□□□□□ -1.91
UPP2-IT1-201ENST00000439185 CRNNQ9UBG3 495 aaPredicted RBP3.15□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TUBE1Q9UJT0 475 aa3.15□□□□□ -1.91
UPP2-IT1-201ENST00000439185 PPIEQ9UNP9 301 aaKnown RBP3.15□□□□□ -1.91
UPP2-IT1-201ENST00000439185 FEZF1A0PJY2 475 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 IPO8O15397 1037 aaKnown RBP3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ADAM20O43506 726 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TOMM70O94826 608 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 STARD3NLO95772 234 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 MATR3P43243 847 aaKnown RBP eCLIP3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 LEPRP48357 1165 aaKnown RBP3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 PDX1P52945 283 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TPD52P55327 224 aaPredicted RBP3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 B3GALT5-AS1P59052 145 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TRA2BP62995 288 aaKnown RBP3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 IFI35P80217 286 aaPredicted RBP3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 CALCOCO2Q13137 446 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SNAPC1Q16533 368 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 RNASEH2BQ5TBB1 312 aaKnown RBP3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 POM121L12Q8N7R1 296 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 OR13J1Q8NGT2 312 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 CFAP61Q8NHU2 1237 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 MIPOL1Q8TD10 442 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 PTERQ96BW5 349 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ARSGQ96EG1 525 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 PRICKLE1Q96MT3 831 aaPredicted RBP3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 PUS3Q9BZE2 481 aaKnown RBP3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 CHST11Q9NPF2 352 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 EQTNQ9NQ60 294 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 CPSF2Q9P2I0 782 aaKnown RBP3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 MORF4L1Q9UBU8 362 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ZHX1Q9UKY1 873 aaPredicted RBP3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 MTUS1Q9ULD2 1270 aa3.14□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TMEM221A6NGB7 291 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 C15orf61A6NNL5 157 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SRRM5B3KS81 715 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 DANCRP0C864 163 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 PFKFB1P16118 471 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 CYP2A7P20853 494 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 LIG4P49917 911 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 UBXN2AP68543 259 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 DMPKQ09013 629 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 MOGAT2Q3SYC2 334 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ENOSF1Q7L5Y1 443 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 PRPF39Q86UA1 669 aaKnown RBP3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ZNF595Q8IYB9 648 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ARHGAP24Q8N264 748 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 AVL9Q8NBF6 648 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 C17orf47Q8NEP4 570 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TSPAN14Q8NG11 270 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 CCDC107Q8WV48 283 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 IRGQQ8WZA9 623 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SLAMF9Q96A28 289 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 DGAT2Q96PD7 388 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 FNBP1Q96RU3 617 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 KLHL4Q9C0H6 718 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TBC1D17Q9HA65 648 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SERINC1Q9NRX5 453 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 DPP3Q9NY33 737 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 STK26Q9P289 416 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 B3GAT1Q9P2W7 334 aa3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 MAGED1Q9Y5V3 778 aaPredicted RBP3.13□□□□□ -1.91
UPP2-IT1-201ENST00000439185 hCG_1809904A0A1W2PP81 198 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 A0A1W2PPE2 198 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 A0A1W2PR64 198 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 MPTX1A8MV57 137 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ABCB1P08183 1280 aaPredicted RBP3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 LINGO3P0C6S8 592 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 PRKACGP22612 351 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 DNASE1P24855 282 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 HERV-K104P61576 105 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 LY6DQ14210 128 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 BECN1Q14457 450 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 RNF212Q495C1 297 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 BMP2KLQ5H9B9 411 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 CFAP58Q5T655 872 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 GPR139Q6DWJ6 353 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 FAM198BQ6UWH4 519 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 KIRREL3Q8IZU9 778 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 NPEPL1Q8NDH3 523 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 OR10G8Q8NGN5 311 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SMAP2Q8WU79 429 aaPredicted RBP3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 DHX58Q96C10 678 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SPDL1Q96EA4 605 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 GAL3ST4Q96RP7 486 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 APOL6Q9BWW8 343 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 GOLPH3LQ9H4A5 285 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 OPA3Q9H6K4 179 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SPHK1Q9NYA1 384 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 IL17BQ9UHF5 180 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 DDX25Q9UHL0 483 aaKnown RBP3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 FAM169AQ9Y6X4 670 aa3.12□□□□□ -1.91
UPP2-IT1-201ENST00000439185 TCRBV21S2A2A0A5A6 115 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 MEIS2O14770 477 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 DFFBO76075 338 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ZNF75DP51815 510 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 HSPB3Q12988 150 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 HIGD2BQ4VC39 106 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 ELFN2Q5R3F8 820 aa3.11□□□□□ -1.91
UPP2-IT1-201ENST00000439185 SEL1L3Q68CR1 1132 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms