RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 CYTH2Q99418 400 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 CITED1Q99966 193 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 BPIFA3Q9BQP9 254 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 NUP58Q9BVL2 599 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 BBS2Q9BXC9 721 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 C1QTNF1Q9BXJ1 281 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 NUSAP1Q9BXS6 441 aaKnown RBP3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 TDRD1Q9BXT4 1180 aaKnown RBP3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 SLCO5A1Q9H2Y9 848 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 MED20Q9H944 212 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 ROPN1Q9HAT0 212 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 TRPC7Q9HCX4 862 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 ASAH2Q9NR71 780 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 IL17RBQ9NRM6 502 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 FBXO28Q9NVF7 368 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 PKD2L2Q9NZM6 624 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 CNOT2Q9NZN8 540 aaKnown RBP3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 VPS54Q9P1Q0 977 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 KIAA1456Q9P272 454 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 HMGXB4Q9UGU5 601 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 FZD10Q9ULW2 581 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 PLCL2Q9UPR0 1127 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 PADI2Q9Y2J8 665 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 SLC27A6Q9Y2P4 619 aa3.52□□□□□ -1.85
HMGB1P12-201ENST00000438594 ASTN2O75129 1339 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 BECN2A8MW95 431 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 USP17L23D6RBM5 183 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 UBE2Q2LH0YL09 131 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 TRIM77I1YAP6 450 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 PSMD11O00231 422 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZNF197O14709 1029 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 SAP30O75446 220 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 TOMM70O94826 608 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 SORBS2O94875 1100 aaKnown RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 SUN1O94901 812 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZWINTO95229 277 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 IGFBP1P08833 259 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 ACAA1P09110 424 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 LINGO3P0C6S8 592 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 RAP2AP10114 183 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 PFKFB1P16118 471 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 IL7RP16871 459 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 IGFBP2P18065 325 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 ATP5JP18859 108 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 UGT1A6P19224 532 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 SRMP19623 302 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 EDN2P20800 178 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 DRD1P21728 446 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 AZGP1P25311 298 aaKnown RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 HOXD9P28356 352 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 PRDX6P30041 224 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 CDAP32320 146 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 SLC1A3P43003 542 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 ALDH3B1P43353 468 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 POU3F4P49335 361 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 GMPSP49915 693 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 CNN1P51911 297 aaKnown RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 CHN2P52757 468 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 CACNA2D1P54289 1103 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 TAS2R50P59544 299 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 LILRA4P59901 499 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 SSTP61278 116 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 HNRNPKP61978 463 aaKnown RBP eCLIP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 RASGEF1BQ0VAM2 473 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 PDIA5Q14554 519 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 PDK3Q15120 406 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 RNPS1Q15287 305 aaKnown RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 COL28A1Q2UY09 1125 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 HNRNPA1L2Q32P51 320 aaKnown RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 SOWAHCQ53LP3 525 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 FAM102AQ5T9C2 384 aaPredicted RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 HHATQ5VTY9 493 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 PRAMEF7Q5VXH5 474 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZDHHC20Q5W0Z9 365 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 CARD17Q5XLA6 110 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 FAM90A2PQ658T7 463 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 LRRC66Q68CR7 880 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 ARMC6Q6NXE6 501 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 C16orf89Q6UX73 402 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZNF852Q6ZMS4 543 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 SLC24A5Q71RS6 500 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 GSTA5Q7RTV2 222 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 KRT27Q7Z3Y8 459 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 TRMT11Q7Z4G4 463 aaKnown RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 YRDCQ86U90 279 aaKnown RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 AQP12AQ8IXF9 295 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 CPXM2Q8N436 756 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 C11orf44Q8N8P7 122 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 AMER3Q8N944 861 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 ANKFN1Q8N957 763 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 STKLD1Q8NE28 680 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 MITD1Q8WV92 249 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 DDB2Q92466 427 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 NSMAFQ92636 917 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 RAD54LQ92698 747 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 KCNJ9Q92806 393 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 CELF1Q92879 486 aaKnown RBP3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 SLCO4A1Q96BD0 722 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 NXNL1Q96CM4 212 aa3.51□□□□□ -1.85
HMGB1P12-201ENST00000438594 TRMT61AQ96FX7 289 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms