RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 CAMTA1Q9Y6Y1 1673 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 EP400Q96L91 3159 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 H3BQ06 376 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 ATP6V0E1O15342 81 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 PLPP2O43688 288 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 PLOD3O60568 738 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 AVILO75366 819 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 GCNT3O95395 438 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 DUX4L4P0CJ87 422 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 SELLP14151 372 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 MMP9P14780 707 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 AKR1B1P15121 316 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 PRLRP16471 622 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 NKX2-1P43699 371 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 SIRPAP78324 504 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 E2F5Q15329 346 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 HLA-BQ31612 363 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 WLSQ5T9L3 541 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 GARNL3Q5VVW2 1013 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 DHRS7BQ6IAN0 325 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 KBTBD6Q86V97 674 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 DNAAF5Q86Y56 855 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 OR8H2Q8N162 312 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 MINDY1Q8N5J2 469 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 SYT2Q8N9I0 419 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 L3MBTL4Q8NA19 623 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 MCUQ8NE86 351 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 ZPLD1Q8TCW7 415 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 ZNF622Q969S3 477 aaKnown RBP eCLIP2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 ERP27Q96DN0 273 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 USP28Q96RU2 1077 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 SLF1Q9BQI6 1058 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 MMP27Q9H306 513 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 ARHGEF38Q9NXL2 777 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 NUDT4Q9NZJ9 180 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 CPSF2Q9P2I0 782 aaKnown RBP2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 ZNF148Q9UQR1 794 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 WBP11Q9Y2W2 641 aaKnown RBP2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 ASTN2O75129 1339 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 ZNF541Q9H0D2 1346 aa2.67□□□□□ -1.98
HMGB1P31-201ENST00000437242 NWD1Q149M9 1564 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 PZPP20742 1482 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 TNRQ92752 1358 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 NDUFS4O43181 175 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 ZNF217O75362 1048 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 KHDRBS3O75525 346 aaKnown RBP2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 ADRB2P07550 413 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 VPREB1P12018 145 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 TRIM21P19474 475 aaKnown RBP2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 HUNKP57058 714 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 IFI35P80217 286 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 LGALS3BPQ08380 585 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 TAF13Q15543 124 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 TMEM198Q66K66 360 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 NAA16Q6N069 864 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 SLC30A6Q6NXT4 461 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 KLC3Q6P597 504 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 CLEC17AQ6ZS10 378 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 LINC00346Q8IVM7 164 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 POMGNT2Q8NAT1 580 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 AVL9Q8NBF6 648 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 KBTBD8Q8NFY9 601 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 PTPMT1Q8WUK0 201 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 ZFAND2BQ8WV99 257 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 HPSE2Q8WWQ2 592 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 KRT12Q99456 494 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 FUCA2Q9BTY2 467 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 DGCR6LQ9BY27 220 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 SPATC1LQ9H0A9 340 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 DNAJC18Q9H819 358 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 PANK3Q9H999 370 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 PAG1Q9NWQ8 432 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 ZDHHC2Q9UIJ5 367 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 PLAGL1Q9UM63 463 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 PPIEQ9UNP9 301 aaKnown RBP2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 WDR37Q9Y2I8 494 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 PTRH2Q9Y3E5 179 aaKnown RBP2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 FAM169AQ9Y6X4 670 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 LRP5O75197 1615 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 KDM5DQ9BY66 1539 aa2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 GPATCH8Q9UKJ3 1502 aaKnown RBP2.66□□□□□ -1.98
HMGB1P31-201ENST00000437242 CHD2O14647 1828 aaKnown RBP2.65□□□□□ -1.98
HMGB1P31-201ENST00000437242 TMEM94Q12767 1356 aa2.65□□□□□ -1.98
HMGB1P31-201ENST00000437242 NHSL1Q5SYE7 1610 aa2.65□□□□□ -1.98
HMGB1P31-201ENST00000437242 ABCA7Q8IZY2 2146 aa2.65□□□□□ -1.98
HMGB1P31-201ENST00000437242 ABCC3O15438 1527 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 LOC102723996A0A087X1L8 192 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 GPR75-ASB3A0A0A6YYF3 556 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 MEX3AA1L020 520 aaKnown RBP2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 TMEM189-UBE2V1I3L0A0 370 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 KLF11O14901 512 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 P4HA2O15460 535 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 ADAM20O43506 726 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 RSL1D1O76021 490 aaKnown RBP2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 CENPBP07199 599 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 ZSCAN5DPP0CG00 497 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 PSMC4P43686 418 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 LIG4P49917 911 aa2.65□□□□□ -1.99
HMGB1P31-201ENST00000437242 SUOXP51687 545 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms