RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 MPP5Q8N3R9 675 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 AADATQ8N5Z0 425 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 ZNF781Q8N8C0 355 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 TSTD1Q8NFU3 115 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 CLDN23Q96B33 292 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 ECHDC3Q96DC8 303 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 SIPA1Q96FS4 1042 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 MRGPRX1Q96LB2 322 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 GON7Q9BXV9 100 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 LHPPQ9H008 270 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 SPAG4Q9NPE6 437 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 CASS4Q9NQ75 786 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 SYBUQ9NX95 663 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 SMPD3Q9NY59 655 aaPredicted RBP11.13□□□□□ -0.63
CECR3-201ENST00000428828 SERGEFQ9UGK8 458 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 ZNF221Q9UK13 617 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 SPEF1Q9Y4P9 236 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 ARIH1Q9Y4X5 557 aaPredicted RBP11.13□□□□□ -0.63
CECR3-201ENST00000428828 CACNA1IQ9P0X4 2223 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 PLXNA2O75051 1894 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 UPK3BL1B0FP48 263 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 UPK3BL2E5RIL1 263 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 ZW10O43264 779 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 ALDOAP04075 364 aaKnown RBP11.13□□□□□ -0.63
CECR3-201ENST00000428828 JUNP05412 331 aaKnown RBP11.13□□□□□ -0.63
CECR3-201ENST00000428828 TRAPPC2P0DI81 140 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 TRAPPC2BP0DI82 140 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 ACADMP11310 421 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 BMP4P12644 408 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 GABRG2P18507 467 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 MSX2P35548 267 aaPredicted RBP11.13□□□□□ -0.63
CECR3-201ENST00000428828 MAGEA12P43365 314 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 GRIA4P48058 902 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 PXNP49023 591 aaPredicted RBP11.13□□□□□ -0.63
CECR3-201ENST00000428828 DGKEP52429 567 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 GALK2Q01415 458 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 AQP6Q13520 282 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 UGP2Q16851 508 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 CYBRD1Q53TN4 286 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 TMEM31Q5JXX7 168 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 SEL1L3Q68CR1 1132 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 FAM45BPQ6NSW5 357 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 ZCCHC8Q6NZY4 707 aaKnown RBP11.13□□□□□ -0.63
CECR3-201ENST00000428828 C8orf82Q6P1X6 216 aaPredicted RBP11.13□□□□□ -0.63
CECR3-201ENST00000428828 BRAT1Q6PJG6 821 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.13□□□□□ -0.63
CECR3-201ENST00000428828 HDDC3Q8N4P3 179 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 FAM45AQ8TCE6 357 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 MAPK15Q8TD08 544 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 ZFP90Q8TF47 636 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 MUL1Q969V5 352 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 PPWD1Q96BP3 646 aaKnown RBP11.13□□□□□ -0.63
CECR3-201ENST00000428828 EBNA1BP2Q99848 306 aaKnown RBP11.13□□□□□ -0.63
CECR3-201ENST00000428828 OMDQ99983 421 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 FBRSQ9HAH7 460 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 ATP13A2Q9NQ11 1180 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 PAK1IP1Q9NWT1 392 aaPredicted RBP11.13□□□□□ -0.63
CECR3-201ENST00000428828 BFARQ9NZS9 450 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 TMEM181Q9P2C4 612 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 A0A0J9YYE9 177 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 OR5K3A6NET4 321 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 NPIPB15A6NHN6 443 aaPredicted RBP11.12□□□□□ -0.63
CECR3-201ENST00000428828 A6NL46 340 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 KCNH1O95259 989 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 EPOP01588 193 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 TRBC1P01850 177 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 ADRB3P13945 408 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 TIMP2P16035 220 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 C5AR1P21730 350 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 FASP25445 335 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 DRD3P35462 400 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 HNF1BP35680 557 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 POLR2IP36954 125 aaKnown RBP11.12□□□□□ -0.63
CECR3-201ENST00000428828 P2RY2P41231 377 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 RPS9P46781 194 aaKnown RBP11.12□□□□□ -0.63
CECR3-201ENST00000428828 POLR2LP62875 67 aaKnown RBP11.12□□□□□ -0.63
CECR3-201ENST00000428828 INPP5AQ14642 412 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 SMAD1Q15797 465 aaKnown RBP11.12□□□□□ -0.63
CECR3-201ENST00000428828 CTF1Q16619 201 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 AGAP6Q5VW22 663 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 RSBN1Q5VWQ0 802 aaPredicted RBP11.12□□□□□ -0.63
CECR3-201ENST00000428828 ZNF544Q6NX49 715 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 USP45Q70EL2 814 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 ERN2Q76MJ5 926 aaKnown RBP11.12□□□□□ -0.63
CECR3-201ENST00000428828 GLT6D1Q7Z4J2 308 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 TSPAN33Q86UF1 283 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 SLCO6A1Q86UG4 719 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 DHFR2Q86XF0 187 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 SPEM1Q8N4L4 309 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 SVOPQ8N4V2 548 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 MDGA1Q8NFP4 955 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 BPIFB6Q8NFQ5 453 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 AGAP4Q96P64 663 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 VPS35Q96QK1 796 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 FUNDC2Q9BWH2 189 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 TPSD1Q9BZJ3 242 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 TM9SF3Q9HD45 589 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 SPATA6Q9NWH7 488 aaPredicted RBP11.12□□□□□ -0.63
CECR3-201ENST00000428828 FBXL12Q9NXK8 326 aa11.12□□□□□ -0.63
CECR3-201ENST00000428828 ADA2Q9NZK5 511 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms