RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 EBLN1P0CF75 366 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 UROSP10746 265 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 CDH1P12830 882 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 GNSP15586 552 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 CD22P20273 847 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 VARSP26640 1264 aaKnown RBP11.67□□□□□ -0.54
RFC4-206ENST00000427785 CTSKP43235 329 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 RAB28P51157 221 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 HNRNPKP61978 463 aaKnown RBP eCLIP11.67□□□□□ -0.54
RFC4-206ENST00000427785 UBE2IP63279 158 aaKnown RBP11.67□□□□□ -0.54
RFC4-206ENST00000427785 IRF8Q02556 426 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 SIM2Q14190 667 aaPredicted RBP11.67□□□□□ -0.54
RFC4-206ENST00000427785 GPR18Q14330 331 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 ARHGAP19Q14CB8 494 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 PLCL1Q15111 1095 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 DEFB133Q30KQ1 61 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 XKR6Q5GH73 641 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 NXNQ6DKJ4 435 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 IYDQ6PHW0 289 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 ZNF761Q86XN6 746 aaPredicted RBP11.67□□□□□ -0.54
RFC4-206ENST00000427785 GKN2Q86XP6 184 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 CLYBLQ8N0X4 340 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 FAM46DQ8NEK8 389 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 OR2L8Q8NGY9 312 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 METTL6Q8TCB7 284 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 SMPDL3AQ92484 453 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 NEIL2Q969S2 332 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 ERP27Q96DN0 273 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 MARK4Q96L34 752 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 C3orf30Q96M34 536 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 NTMT1Q9BV86 223 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 SLC29A3Q9BZD2 475 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 STN1Q9H668 368 aaKnown RBP11.67□□□□□ -0.54
RFC4-206ENST00000427785 MEAF6Q9HAF1 191 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 C11orf16Q9NQ32 467 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 TCF7L2Q9NQB0 619 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 POT1Q9NUX5 634 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 UCKL1Q9NWZ5 548 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 HEY2Q9UBP5 337 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 SUSD2Q9UGT4 822 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 COLEC10Q9Y6Z7 277 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 ASXL3Q9C0F0 2248 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 RP1P56715 2156 aa11.67□□□□□ -0.54
RFC4-206ENST00000427785 KIR2DS5A0A0G2JLQ3 304 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 A0A0G2JNG1 304 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 ATP6AP2A0A1C7CYW4 349 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 PRR5-ARHGAP8B1AHC4 643 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 KIR2DS3K7RE56 304 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 MANBAO00462 879 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 ATP6AP2O75787 350 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 CLDN9O95484 217 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 CHEK2O96017 543 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 VIPP01282 170 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 FGF4P08620 206 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 LINC00032P0C843 101 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 SLC2A4P14672 509 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 CCND1P24385 295 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 NDUFS1P28331 727 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 PEBP1P30086 187 aaKnown RBP11.66□□□□□ -0.54
RFC4-206ENST00000427785 YBX1P67809 324 aaKnown RBP11.66□□□□□ -0.54
RFC4-206ENST00000427785 IFT88Q13099 833 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 DOC2AQ14183 400 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 KIR2DS5Q14953 304 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 CPSF6Q16630 551 aaKnown RBP eCLIP11.66□□□□□ -0.54
RFC4-206ENST00000427785 ZSCAN26Q16670 478 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 ZNF528Q3MIS6 628 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 GGTA1PQ4G0N0 100 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 SGO1Q5FBB7 561 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 CATSPEREQ5SY80 951 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 TMEM198Q66K66 360 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 IL27RAQ6UWB1 636 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 LCTLQ6UWM7 567 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 ACAD11Q709F0 780 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 ZNF771Q7L3S4 317 aaPredicted RBP11.66□□□□□ -0.54
RFC4-206ENST00000427785 EFL1Q7Z2Z2 1120 aaKnown RBP11.66□□□□□ -0.54
RFC4-206ENST00000427785 SYT12Q8IV01 421 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 SFRP1Q8N474 314 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 ZBTB44Q8NCP5 570 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 SLC5A11Q8WWX8 675 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 LCN9Q8WX39 176 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 SH3KBP1Q96B97 665 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 PLCD4Q9BRC7 762 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 NMUR2Q9GZQ4 415 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 MYLK2Q9H1R3 596 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 FARSBQ9NSD9 589 aaKnown RBP11.66□□□□□ -0.54
RFC4-206ENST00000427785 CUEDC1Q9NWM3 386 aaPredicted RBP11.66□□□□□ -0.54
RFC4-206ENST00000427785 GPRC5BQ9NZH0 403 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 CPNE7Q9UBL6 633 aa11.66□□□□□ -0.54
RFC4-206ENST00000427785 G3BP2Q9UN86 482 aaKnown RBP11.66□□□□□ -0.54
RFC4-206ENST00000427785 ADAMTS20P59510 1910 aa11.65□□□□□ -0.54
RFC4-206ENST00000427785 PATE3B3GLJ2 98 aa11.65□□□□□ -0.54
RFC4-206ENST00000427785 EBAG9O00559 213 aa11.65□□□□□ -0.54
RFC4-206ENST00000427785 FCHO1O14526 889 aa11.65□□□□□ -0.54
RFC4-206ENST00000427785 YY2O15391 372 aa11.65□□□□□ -0.54
RFC4-206ENST00000427785 KDM1AO60341 852 aa11.65□□□□□ -0.54
RFC4-206ENST00000427785 DCTN3O75935 186 aa11.65□□□□□ -0.54
RFC4-206ENST00000427785 ANXA6P08133 673 aa11.65□□□□□ -0.54
RFC4-206ENST00000427785 JUPP14923 745 aa11.65□□□□□ -0.54
RFC4-206ENST00000427785 NPPBP16860 134 aa11.65□□□□□ -0.54
RFC4-206ENST00000427785 SHMT2P34897 504 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms