RNA–Protein interactions for RNA: ENST00000426951.5

RBM39-211, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best)

Gene RBM39, Length 840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-211ENST00000426951 GSRP00390 522 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 GPIP06744 558 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 FDPSP14324 419 aaKnown RBP3.79□□□□□ -1.8
RBM39-211ENST00000426951 PTAFRP25105 342 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 CD27P26842 260 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 CSTF2P33240 577 aaKnown RBP eCLIP3.79□□□□□ -1.8
RBM39-211ENST00000426951 MAGEA11P43364 429 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 ATP12AP54707 1039 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 HERV-K104P61576 105 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 PPIGQ13427 754 aaKnown RBP eCLIP3.79□□□□□ -1.84e-21■□□□□ 10.1
RBM39-211ENST00000426951 KRT81Q14533 505 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 PHKG1Q16816 387 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 TMEM30BQ3MIR4 351 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 KIRREL3Q8IZU9 778 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 CCAR2Q8N163 923 aaKnown RBP3.79□□□□□ -1.8
RBM39-211ENST00000426951 SUSD6Q92537 303 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 EXT2Q93063 718 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 KATNB1Q9BVA0 655 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 KRTAP4-4Q9BYR3 166 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 FZD8Q9H461 694 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 Q9H8V8 135 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 TRPV4Q9HBA0 871 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 DNAJC4Q9NNZ3 241 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 MDFICQ9P1T7 246 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 POLLQ9UGP5 575 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 ANAPC5Q9UJX4 755 aa3.79□□□□□ -1.8
RBM39-211ENST00000426951 MRPS28Q9Y2Q9 187 aaKnown RBP3.79□□□□□ -1.8
RBM39-211ENST00000426951 DISP3Q9P2K9 1392 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 EDIL3O43854 480 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 EPCAMP16422 314 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 ALDH4A1P30038 563 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 ZNF273Q14593 569 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 SLC35D3Q5M8T2 416 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 SUSD1Q6UWL2 747 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 FAM47EQ6ZV65 393 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 ERN2Q76MJ5 926 aaKnown RBP3.78□□□□□ -1.8
RBM39-211ENST00000426951 NOTCH2NLQ7Z3S9 236 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 ADCK2Q7Z695 626 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 IQUBQ8NA54 791 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 DDHD1Q8NEL9 900 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 OR10Q1Q8NGQ4 319 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 OR13C3Q8NGS6 347 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 CTCFLQ8NI51 663 aaPredicted RBP3.78□□□□□ -1.8
RBM39-211ENST00000426951 KCNE4Q8WWG9 221 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 PROX1Q92786 737 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 RBM4Q9BWF3 364 aaKnown RBP3.78□□□□□ -1.8
RBM39-211ENST00000426951 GTPBP2Q9BX10 602 aaKnown RBP3.78□□□□□ -1.8
RBM39-211ENST00000426951 PANK2Q9BZ23 570 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 CPVLQ9H3G5 476 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 TLE6Q9H808 572 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 TXNDC16Q9P2K2 825 aa3.78□□□□□ -1.8
RBM39-211ENST00000426951 IGHV4-4A0A075B6R2 117 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 CASTOR2A6NHX0 329 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 PSMD14O00487 310 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 KLF11O14901 512 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 AP2A2O94973 939 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 APOHP02749 345 aaPredicted RBP3.77□□□□□ -1.81
RBM39-211ENST00000426951 RAF1P04049 648 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 KLC1Q07866 573 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 NPTX1Q15818 432 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 ADAM5Q6NVV9 412 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 BHLHB9Q6PI77 547 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 FAM219AQ8IW50 185 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 RYBPQ8N488 228 aaPredicted RBP3.77□□□□□ -1.81
RBM39-211ENST00000426951 KLHDC1Q8N7A1 406 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 ZNF248Q8NDW4 579 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 RMDN2Q96LZ7 410 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 ZMAT2Q96NC0 199 aaKnown RBP3.77□□□□□ -1.81
RBM39-211ENST00000426951 BARHL1Q9BZE3 327 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 ZMYND12Q9H0C1 365 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 XAB2Q9HCS7 855 aaKnown RBP3.77□□□□□ -1.81
RBM39-211ENST00000426951 PFDN4Q9NQP4 134 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 PYGO1Q9Y3Y4 419 aa3.77□□□□□ -1.81
RBM39-211ENST00000426951 RPS6KA5O75582 802 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 ATP6AP2O75787 350 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 HSPA4LO95757 839 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 QDPRP09417 244 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 PDGFRAP16234 1089 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 LHCGRP22888 699 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 ACAT1P24752 427 aaKnown RBP3.76□□□□□ -1.81
RBM39-211ENST00000426951 CDC25CP30307 473 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 NPY4RP50391 375 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 ALDH3A2P51648 485 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 VAMP7P51809 220 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 LBX1P52954 281 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 GSDMDP57764 484 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 SNRPD1P62314 119 aaKnown RBP3.76□□□□□ -1.81
RBM39-211ENST00000426951 ITGA9Q13797 1035 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 HNRNPDQ14103 355 aaKnown RBP3.76□□□□□ -1.81
RBM39-211ENST00000426951 PSMD6Q15008 389 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 NONOQ15233 471 aaKnown RBP eCLIP3.76□□□□□ -1.81
RBM39-211ENST00000426951 LACTB2Q53H82 288 aaPredicted RBP3.76□□□□□ -1.81
RBM39-211ENST00000426951 LCN1P1Q5VSP4 162 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 PWWP2BQ6NUJ5 590 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 IL27RAQ6UWB1 636 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 TMEM207Q6UWW9 146 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 Q6ZSR9 355 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 NDUFAF2Q8N183 169 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 NIPA2Q8N8Q9 360 aa3.76□□□□□ -1.81
RBM39-211ENST00000426951 RASGEF1AQ8N9B8 481 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms