RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 COPS8Q99627 209 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 SLC29A1Q99808 456 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 SLC24A3Q9HC58 644 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 GMPR2Q9P2T1 348 aaKnown RBP14.43□□□□□ -0.1
USP4-203ENST00000415188 EGFL7Q9UHF1 273 aa14.43□□□□□ -0.1
USP4-203ENST00000415188 INTS6Q9UL03 887 aaKnown RBP14.43□□□□□ -0.1
USP4-203ENST00000415188 POLR3HQ9Y535 204 aaPredicted RBP14.43□□□□□ -0.1
USP4-203ENST00000415188 ZFC3H1O60293 1989 aaKnown RBP14.42□□□□□ -0.1
USP4-203ENST00000415188 TBC1D3BA6NDS4 549 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 NPIPB15A6NHN6 443 aaPredicted RBP14.42□□□□□ -0.1
USP4-203ENST00000415188 INPP4BO15327 924 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 SLC16A5O15375 505 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 ADAM23O75077 832 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 STK16O75716 305 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 RASAL1O95294 804 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 H6PDO95479 791 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 C8GP07360 202 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 OR56A5P0C7T3 313 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 G6PDP11413 515 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 EPB42P16452 691 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 ITGB6P18564 788 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 UGT1A6P19224 532 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 UGT1A1P22309 533 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 UGT1A4P22310 534 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 UGT1A3P35503 534 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 UGT1A5P35504 534 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 GGT5P36269 586 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 MPLP40238 635 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 TNFRSF4P43489 277 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 CCT8P50990 548 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 SP140Q13342 867 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 GBX1Q14549 363 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 ABRAXAS2Q15018 415 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 GGTA1PQ4G0N0 100 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 KCTD21Q4G0X4 260 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 RABL3Q5HYI8 236 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 NHSL2Q5HYW2 709 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 PLA2G2CQ5R387 149 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 CACHD1Q5VU97 1274 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 TCEAL6Q6IPX3 200 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 KRT80Q6KB66 452 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 DLEU7Q6UYE1 221 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 TFAP2CQ92754 450 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 USP7Q93009 1102 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 TCEAL3Q969E4 200 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 CCDC115Q96NT0 180 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 CDK15Q96Q40 435 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 CGREF1Q99674 301 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 SH3GL1Q99961 368 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 TNKS2Q9H2K2 1166 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 RAD18Q9NS91 495 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 DEC1Q9P2X7 70 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 HCN2Q9UL51 889 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 MYRFQ9Y2G1 1151 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 RNF11Q9Y3C5 154 aa14.42□□□□□ -0.1
USP4-203ENST00000415188 ARHGAP10A1A4S6 786 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 WASH3PC4AMC7 463 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 NEDD8-MDP1E9PL57 170 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 MANBAO00462 879 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 KPNA5O15131 536 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 ULK1O75385 1050 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 KCNH1O95259 989 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 GUCA1CO95843 209 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 KRT6AP02538 564 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 KRT6BP04259 564 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 IL6P05231 212 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 CDH1P12830 882 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 NFKBIAP25963 317 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 AKT1P31749 480 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 CA5AP35218 305 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 GNPDA1P46926 289 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 KRT6CP48668 564 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 POLR2LP62875 67 aaKnown RBP14.41□□□□□ -0.1
USP4-203ENST00000415188 PHKG1Q16816 387 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 C18orf21Q32NC0 220 aaPredicted RBP14.41□□□□□ -0.1
USP4-203ENST00000415188 USP39Q53GS9 565 aaKnown RBP14.41□□□□□ -0.1
USP4-203ENST00000415188 CARD16Q5EG05 197 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 LRRC66Q68CR7 880 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 NEK10Q6ZWH5 1172 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 SATL1Q86VE3 508 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 ZSWIM9Q86XI8 627 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 CLDN19Q8N6F1 224 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 GPR26Q8NDV2 337 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 SPDYE1Q8NFV5 336 aaPredicted RBP14.41□□□□□ -0.1
USP4-203ENST00000415188 RLN3Q8WXF3 142 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 BHMTQ93088 406 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 NSMCE2Q96MF7 247 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 PRPF18Q99633 342 aaKnown RBP14.41□□□□□ -0.1
USP4-203ENST00000415188 BBS2Q9BXC9 721 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 ACTL8Q9H568 366 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 INTS7Q9NVH2 962 aaKnown RBP14.41□□□□□ -0.1
USP4-203ENST00000415188 SMOXQ9NWM0 555 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 TUBA8Q9NY65 449 aaPredicted RBP14.41□□□□□ -0.1
USP4-203ENST00000415188 DMTF1Q9Y222 760 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 PCDHGA5Q9Y5G8 931 aa14.41□□□□□ -0.1
USP4-203ENST00000415188 ABCA7Q8IZY2 2146 aa14.4□□□□□ -0.1
USP4-203ENST00000415188 SERTM1A2A2V5 107 aa14.4□□□□□ -0.1
USP4-203ENST00000415188 SAC3D1A6NKF1 404 aa14.4□□□□□ -0.1
USP4-203ENST00000415188 NPIPB8E9PQR5 432 aa14.4□□□□□ -0.1
USP4-203ENST00000415188 H3BNH8 94 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms