RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 PSMB5P28074 263 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 RORAP35398 523 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 GRIA3P42263 894 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 RPL21P46778 160 aaKnown RBP10.77□□□□□ -0.69
RFFL-204ENST00000414419 GABRA4P48169 554 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 PNLIPRP1P54315 467 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 ARSFP54793 590 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 RPS18P62269 152 aaKnown RBP10.77□□□□□ -0.69
RFFL-204ENST00000414419 FASTKQ14296 549 aaKnown RBP10.77□□□□□ -0.69
RFFL-204ENST00000414419 ARHGAP19Q14CB8 494 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 CYP2A13Q16696 494 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.77□□□□□ -0.69
RFFL-204ENST00000414419 TCTE1Q5JU00 501 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 C1orf189Q5VU69 101 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 MLIPQ5VWP3 458 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 RHBDD2Q6NTF9 364 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 ZNF517Q6ZMY9 492 aaPredicted RBP10.77□□□□□ -0.69
RFFL-204ENST00000414419 UBE2R2Q712K3 238 aaPredicted RBP10.77□□□□□ -0.69
RFFL-204ENST00000414419 CNTN4Q8IWV2 1026 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 CPNE9Q8IYJ1 553 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 ENDOVQ8N8Q3 282 aaKnown RBP10.77□□□□□ -0.69
RFFL-204ENST00000414419 FBXO36Q8NEA4 188 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 OR2L3Q8NG85 312 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 GIMAP7Q8NHV1 300 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 PROKR1Q8TCW9 393 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 CD200R1Q8TD46 325 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 MCOLN3Q8TDD5 553 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 ASB11Q8WXH4 323 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 THAP4Q8WY91 577 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 DLG3Q92796 817 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 RUFY1Q96T51 708 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 PKP4Q99569 1192 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 ERP44Q9BS26 406 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 ACAT2Q9BWD1 397 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 SLC25A18Q9H1K4 315 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 DPH5Q9H2P9 285 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 MRPS30Q9NP92 439 aaKnown RBP10.77□□□□□ -0.69
RFFL-204ENST00000414419 ABCF3Q9NUQ8 709 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 UTP6Q9NYH9 597 aaKnown RBP10.77□□□□□ -0.69
RFFL-204ENST00000414419 ZFATQ9P243 1243 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 NDOR1Q9UHB4 597 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 TUBD1Q9UJT1 453 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 PADI2Q9Y2J8 665 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 UTP11Q9Y3A2 253 aaKnown RBP10.77□□□□□ -0.69
RFFL-204ENST00000414419 TEX264Q9Y6I9 313 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 SPTA1P02549 2419 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 HCRTR1O43613 425 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 SRPX2O60687 465 aaPredicted RBP10.76□□□□□ -0.69
RFFL-204ENST00000414419 CCNDBP1O95273 360 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 HIST1H2AGP0C0S8 130 aaPredicted RBP10.76□□□□□ -0.69
RFFL-204ENST00000414419 HIST1H2ADP20671 130 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 DCDP81605 110 aaKnown RBP10.76□□□□□ -0.69
RFFL-204ENST00000414419 MRPS25P82663 173 aaKnown RBP10.76□□□□□ -0.69
RFFL-204ENST00000414419 C2orf54Q08AI8 447 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 PDAP1Q13442 181 aaKnown RBP10.76□□□□□ -0.69
RFFL-204ENST00000414419 GRM7Q14831 915 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 UGT8Q16880 541 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 FAM214AQ32MH5 1076 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 TEDDM1Q5T9Z0 273 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 THEMIS2Q5TEJ8 643 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 STEAP4Q687X5 459 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 FCRL6Q6DN72 434 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 LCN10Q6JVE6 187 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 SUSD1Q6UWL2 747 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 PIWIL4Q7Z3Z4 852 aaKnown RBP10.76□□□□□ -0.69
RFFL-204ENST00000414419 GALNT7Q86SF2 657 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 ZBED8Q8IZ13 594 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 MYO1HQ8N1T3 1032 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 GPATCH11Q8N954 259 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 TTC29Q8NA56 475 aaPredicted RBP10.76□□□□□ -0.69
RFFL-204ENST00000414419 FBXO15Q8NCQ5 510 aaPredicted RBP10.76□□□□□ -0.69
RFFL-204ENST00000414419 OR2A1Q8NGT9 310 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 EEF1AKMT1Q8WVE0 214 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 HIST1H2AHQ96KK5 128 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 HIST1H2AJQ99878 128 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 SELENOSQ9BQE4 189 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 H2AFJQ9BTM1 129 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 DHRS4Q9BTZ2 278 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 RAB17Q9H0T7 212 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 WHRNQ9P202 907 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 IFT80Q9P2H3 777 aaPredicted RBP10.76□□□□□ -0.69
RFFL-204ENST00000414419 DHCR7Q9UBM7 475 aaKnown RBP10.76□□□□□ -0.69
RFFL-204ENST00000414419 TCFL5Q9UL49 500 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 CORO1CQ9ULV4 474 aaPredicted RBP10.76□□□□□ -0.69
RFFL-204ENST00000414419 MED16Q9Y2X0 877 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 VWA7Q9Y334 891 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 KCNMB2Q9Y691 235 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 MED13Q9UHV7 2174 aa10.76□□□□□ -0.69
RFFL-204ENST00000414419 A0A0J9YVX5 310 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 A0A1W2PPV9 198 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 H3BMH7 237 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 MKRN2OSH3BPM6 223 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 GFYI3L273 518 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 RAD51CO43502 376 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 RFPL1O75677 317 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 SLC16A8O95907 504 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 C8GP07360 202 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 FURINP09958 794 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 ERGP11308 486 aa10.75□□□□□ -0.69
RFFL-204ENST00000414419 PIM1P11309 404 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms