RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 FAM169AQ9Y6X4 670 aa15.98■□□□□ 0.15
MRPL55-220ENST00000411464 USP1O94782 785 aa15.97■□□□□ 0.15
MRPL55-220ENST00000411464 IPO7O95373 1038 aaKnown RBP15.97■□□□□ 0.15
MRPL55-220ENST00000411464 GRB7Q14451 532 aa15.97■□□□□ 0.15
MRPL55-220ENST00000411464 TMED2Q15363 201 aa15.97■□□□□ 0.15
MRPL55-220ENST00000411464 FASTKD1Q53R41 847 aaKnown RBP15.97■□□□□ 0.15
MRPL55-220ENST00000411464 PRMT9Q6P2P2 845 aa15.97■□□□□ 0.15
MRPL55-220ENST00000411464 RAB42Q8N4Z0 105 aa15.97■□□□□ 0.15
MRPL55-220ENST00000411464 RNF214Q8ND24 703 aa15.97■□□□□ 0.15
MRPL55-220ENST00000411464 RELTQ969Z4 430 aa15.97■□□□□ 0.15
MRPL55-220ENST00000411464 TMEM121Q9BTD3 319 aa15.97■□□□□ 0.15
MRPL55-220ENST00000411464 SLC2A6Q9UGQ3 507 aa15.97■□□□□ 0.15
MRPL55-220ENST00000411464 ZC3H7BQ9UGR2 993 aaKnown RBP15.97■□□□□ 0.15
MRPL55-220ENST00000411464 C3orf18Q9UK00 162 aa15.97■□□□□ 0.15
MRPL55-220ENST00000411464 DUSP10Q9Y6W6 482 aa15.97■□□□□ 0.15
MRPL55-220ENST00000411464 NSG1A0A0A6YYJ2 146 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 RCCD1A6NED2 376 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 ERI2A8K979 691 aaKnown RBP15.96■□□□□ 0.15
MRPL55-220ENST00000411464 IQCF5A8MTL0 148 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 CTSVO60911 334 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 SLCO2B1O94956 709 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 EIF2S1P05198 315 aaKnown RBP15.96■□□□□ 0.15
MRPL55-220ENST00000411464 ZGLP1P0C6A0 271 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 PTMSP20962 102 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 ADRA1DP25100 572 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 AOAHP28039 575 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 GDF10P55107 478 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 PRAMEP78395 509 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 TSTD2Q5T7W7 516 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 ATG9BQ674R7 924 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 PPP1R21Q6ZMI0 780 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 MCEMP1Q8IX19 187 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 DTWD1Q8N5C7 304 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 SKA2Q8WVK7 121 aaPredicted RBP15.96■□□□□ 0.15
MRPL55-220ENST00000411464 RAD51AP1Q96B01 352 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 C8orf44Q96CB5 159 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 MRFAP1L1Q96HT8 127 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 TSPY26PQ9H489 355 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 PTGFRNQ9P2B2 879 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 ANAPC5Q9UJX4 755 aa15.96■□□□□ 0.15
MRPL55-220ENST00000411464 TTC7AQ9ULT0 858 aaPredicted RBP15.96■□□□□ 0.15
MRPL55-220ENST00000411464 TRAV17A0A0B4J275 112 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 E7EVH7 732 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 UQCRHP07919 91 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 ERVK-10P10266 1014 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 FDXRP22570 491 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 CXCR2P25025 360 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 KCNK10P57789 538 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 ART3Q13508 389 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 MUM1Q2TAK8 710 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 AARS2Q5JTZ9 985 aaKnown RBP15.95■□□□□ 0.14
MRPL55-220ENST00000411464 ZNF324BQ6AW86 544 aaPredicted RBP15.95■□□□□ 0.14
MRPL55-220ENST00000411464 PTRHD1Q6GMV3 140 aaKnown RBP15.95■□□□□ 0.14
MRPL55-220ENST00000411464 FRMPD2BQ6IN97 320 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 NDUFAF7Q7L592 441 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 UBL4BQ8N7F7 174 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 LKAAEAR1Q8TD35 194 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 MIPEPQ99797 713 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 MESP1Q9BRJ9 268 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 TRIM56Q9BRZ2 755 aaKnown RBP15.95■□□□□ 0.14
MRPL55-220ENST00000411464 PLA2G3Q9NZ20 509 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 RIMKLBQ9ULI2 386 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 MRFAP1Q9Y605 127 aa15.95■□□□□ 0.14
MRPL55-220ENST00000411464 EPN1Q9Y6I3 576 aaPredicted RBP15.95■□□□□ 0.14
MRPL55-220ENST00000411464 TEP1Q99973 2627 aaKnown RBP15.94■□□□□ 0.14
MRPL55-220ENST00000411464 LOC105369274A0A096LPK9 316 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 LOC102723532A0A0G2JNH3 316 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 A0A0J9YVX5 310 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 BTNL10A8MVZ5 291 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 PRMT5O14744 637 aaPredicted RBP15.94■□□□□ 0.14
MRPL55-220ENST00000411464 PCDH17O14917 1159 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 PRICKLE3O43900 615 aaPredicted RBP15.94■□□□□ 0.14
MRPL55-220ENST00000411464 PRR35P0CG20 571 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 STIP1P31948 543 aaKnown RBP15.94■□□□□ 0.14
MRPL55-220ENST00000411464 TNFSF10P50591 281 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 EMP2P54851 167 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 ACVR1Q04771 509 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 SEMA3AQ14563 771 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 INAQ16352 499 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 TMEM207Q6UWW9 146 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 GFRALQ6UXV0 394 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 ZNF534Q76KX8 674 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 OR4N4Q8N0Y3 316 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 KRT222Q8N1A0 295 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 LRRC57Q8N9N7 239 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 OR2L3Q8NG85 312 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 SLC35B2Q8TB61 432 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 NR4A3Q92570 626 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 HAS2Q92819 552 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 ZNF778Q96MU6 729 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 YIPF2Q9BWQ6 316 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 TRIM5Q9C035 493 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 SUCOQ9UBS9 1254 aaKnown RBP15.94■□□□□ 0.14
MRPL55-220ENST00000411464 AMFRQ9UKV5 643 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 R3HDM2Q9Y2K5 976 aaKnown RBP15.94■□□□□ 0.14
MRPL55-220ENST00000411464 MRPS2Q9Y399 296 aaKnown RBP15.94■□□□□ 0.14
MRPL55-220ENST00000411464 KLK4Q9Y5K2 254 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 FER1L5A0AVI2 2057 aa15.94■□□□□ 0.14
MRPL55-220ENST00000411464 KPNA5O15131 536 aa15.93■□□□□ 0.14
MRPL55-220ENST00000411464 WFS1O76024 890 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms