RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 FAM174AQ8TBP5 190 aa5.35□□□□□ -1.55
EPHA4-202ENST00000409854 WDR20Q8TBZ3 569 aa5.35□□□□□ -1.55
EPHA4-202ENST00000409854 SETD7Q8WTS6 366 aaKnown RBP5.35□□□□□ -1.55
EPHA4-202ENST00000409854 OR1E3Q8WZA6 343 aa5.35□□□□□ -1.55
EPHA4-202ENST00000409854 PDXPQ96GD0 296 aa5.35□□□□□ -1.55
EPHA4-202ENST00000409854 PPP3R2Q96LZ3 170 aa5.35□□□□□ -1.55
EPHA4-202ENST00000409854 HHIPQ96QV1 700 aa5.35□□□□□ -1.55
EPHA4-202ENST00000409854 MYOCQ99972 504 aa5.35□□□□□ -1.55
EPHA4-202ENST00000409854 IER2Q9BTL4 223 aa5.35□□□□□ -1.55
EPHA4-202ENST00000409854 PCED1AQ9H1Q7 454 aa5.35□□□□□ -1.55
EPHA4-202ENST00000409854 TRIT1Q9H3H1 467 aaKnown RBP5.35□□□□□ -1.55
EPHA4-202ENST00000409854 EHD1Q9H4M9 534 aa5.35□□□□□ -1.55
EPHA4-202ENST00000409854 SLC52A3Q9NQ40 469 aa5.35□□□□□ -1.55
EPHA4-202ENST00000409854 FARSBQ9NSD9 589 aaKnown RBP5.35□□□□□ -1.55
EPHA4-202ENST00000409854 TUBA8Q9NY65 449 aaPredicted RBP5.35□□□□□ -1.55
EPHA4-202ENST00000409854 KLQ9UEF7 1012 aa5.35□□□□□ -1.55
EPHA4-202ENST00000409854 PCOLCE2Q9UKZ9 415 aa5.35□□□□□ -1.55
EPHA4-202ENST00000409854 PNMA8BQ9ULN7 279 aaPredicted RBP5.35□□□□□ -1.55
EPHA4-202ENST00000409854 SNX6Q9UNH7 406 aa5.35□□□□□ -1.55
EPHA4-202ENST00000409854 ASF1AQ9Y294 204 aa5.35□□□□□ -1.55
EPHA4-202ENST00000409854 IFRD1O00458 451 aaPredicted RBP5.34□□□□□ -1.55
EPHA4-202ENST00000409854 RGS14O43566 566 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 ULK1O75385 1050 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 PDYNP01213 254 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 NPPBP16860 134 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 ITGAXP20702 1163 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 HNF4AP41235 474 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 GNPDA1P46926 289 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 RABIFP47224 123 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 CSTF3Q12996 717 aaKnown RBP5.34□□□□□ -1.55
EPHA4-202ENST00000409854 CHIT1Q13231 466 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 UAP1L1Q3KQV9 507 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 ATP6AP1LQ52LC2 224 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 LCTLQ6UWM7 567 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 SLCO4C1Q6ZQN7 724 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 LONP2Q86WA8 852 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 PGBD3Q8N328 593 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 SPEM1Q8N4L4 309 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 PPFIBP2Q8ND30 876 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 TSPEARQ8WU66 669 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 BIRC7Q96CA5 298 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 FCRL1Q96LA6 429 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 INSM2Q96T92 566 aaPredicted RBP5.34□□□□□ -1.55
EPHA4-202ENST00000409854 TWSG1Q9GZX9 223 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 TBC1D17Q9HA65 648 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.34□□□□□ -1.55
EPHA4-202ENST00000409854 FBXL21Q9UKT6 434 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 ZNF490Q9ULM2 529 aaPredicted RBP5.34□□□□□ -1.55
EPHA4-202ENST00000409854 G3BP2Q9UN86 482 aaKnown RBP5.34□□□□□ -1.55
EPHA4-202ENST00000409854 PSMD13Q9UNM6 376 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 CA5BQ9Y2D0 317 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 TSC22D4Q9Y3Q8 395 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 PLEKHM1Q9Y4G2 1056 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 DGKBQ9Y6T7 804 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 HEATR5BQ9P2D3 2071 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 SNRNP200O75643 2136 aaKnown RBP5.34□□□□□ -1.55
EPHA4-202ENST00000409854 A0A1W2PPC4 97 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 A6NCN8 305 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 MEI4A8MW99 385 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 FFAR3O14843 346 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 ANKRD28O15084 1053 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 GPR42O15529 346 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 AHCYL1O43865 530 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 MGRN1O60291 552 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 PEX11AO75192 247 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 RSL1D1O76021 490 aaKnown RBP5.34□□□□□ -1.55
EPHA4-202ENST00000409854 GNAZP19086 355 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 IDSP22304 550 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 HTR1BP28222 390 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 TPP2P29144 1249 aaPredicted RBP5.34□□□□□ -1.55
EPHA4-202ENST00000409854 RAP1GDS1P52306 607 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 STX1BP61266 288 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 DOC2AQ14183 400 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 KIAA0040Q15053 153 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 COQ5Q5HYK3 327 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 ATG9BQ674R7 924 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 C8orf82Q6P1X6 216 aaPredicted RBP5.34□□□□□ -1.55
EPHA4-202ENST00000409854 SCIMPQ6UWF3 145 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 ABRAXAS1Q6UWZ7 409 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 GK5Q6ZS86 529 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 ZFAND4Q86XD8 727 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 SLC22A18ASQ8N1D0 253 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 MIER2Q8N344 545 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 CAMKK1Q8N5S9 505 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 PHC3Q8NDX5 983 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 NEIL2Q969S2 332 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 MED8Q96G25 268 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 RSRC1Q96IZ7 334 aaKnown RBP5.34□□□□□ -1.55
EPHA4-202ENST00000409854 ACPTQ9BZG2 426 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 MVB12BQ9H7P6 319 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 CARS2Q9HA77 564 aaKnown RBP5.34□□□□□ -1.55
EPHA4-202ENST00000409854 CCDC177Q9NQR7 707 aaPredicted RBP5.34□□□□□ -1.55
EPHA4-202ENST00000409854 ZIM2Q9NZV7 527 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 KCNK6Q9Y257 313 aa5.34□□□□□ -1.55
EPHA4-202ENST00000409854 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.34□□□□□ -1.55
EPHA4-202ENST00000409854 A0A1W2PPV9 198 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 ZNF839A8K0R7 811 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 BBIP1A8MTZ0 92 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 FBP2O00757 339 aa5.33□□□□□ -1.56
EPHA4-202ENST00000409854 PI15O43692 258 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms