RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 KRT31Q15323 416 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 MAPK6Q16659 721 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 SOWAHCQ53LP3 525 aaPredicted RBP4.22□□□□□ -1.73
CLK1-203ENST00000409769 GGNBP1Q5YKI7 109 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 ANKRD33Q7Z3H0 272 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 FAM114A1Q8IWE2 563 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 ZBTB8OSQ8IWT0 167 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 SYCP3Q8IZU3 236 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 GPD1LQ8N335 351 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 SPATA6LQ8N4H0 392 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 WBP2Q969T9 261 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 EEF2KMTQ96G04 330 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 CNOT6LQ96LI5 555 aaKnown RBP4.22□□□□□ -1.73
CLK1-203ENST00000409769 NAP1L5Q96NT1 182 aaPredicted RBP4.22□□□□□ -1.73
CLK1-203ENST00000409769 GCOM2Q9BZD3 368 aaPredicted RBP4.22□□□□□ -1.73
CLK1-203ENST00000409769 FAM49AQ9H0Q0 323 aaPredicted RBP4.22□□□□□ -1.73
CLK1-203ENST00000409769 PDZD7Q9H5P4 517 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 EBF2Q9HAK2 575 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 HINT3Q9NQE9 182 aaKnown RBP4.22□□□□□ -1.73
CLK1-203ENST00000409769 CNGB3Q9NQW8 809 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 PRMT7Q9NVM4 692 aaPredicted RBP4.22□□□□□ -1.73
CLK1-203ENST00000409769 TRPV2Q9Y5S1 764 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 SCN1AP35498 2009 aa4.22□□□□□ -1.73
CLK1-203ENST00000409769 PTPRSQ13332 1948 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 AKR1B15C9JRZ8 316 aaPredicted RBP4.21□□□□□ -1.74
CLK1-203ENST00000409769 EXTL3O43909 919 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 CSDE1O75534 798 aaKnown RBP4.21□□□□□ -1.74
CLK1-203ENST00000409769 TIPRLO75663 272 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 RTN3O95197 1032 aaPredicted RBP4.21□□□□□ -1.74
CLK1-203ENST00000409769 CLDN14O95500 239 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 ADCY5O95622 1261 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 CGAP01215 116 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 CYC1P08574 325 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 EPB41P11171 864 aaKnown RBP4.21□□□□□ -1.74
CLK1-203ENST00000409769 AXLP30530 894 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 LIG4P49917 911 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 ZNF75DP51815 510 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 HNRNPH2P55795 449 aaKnown RBP4.21□□□□□ -1.74
CLK1-203ENST00000409769 UBASH3AP57075 661 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 TPM4P67936 248 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 OLR1P78380 273 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 POU5F1Q01860 360 aaKnown RBP4.21□□□□□ -1.74
CLK1-203ENST00000409769 BFSP1Q12934 665 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 PRPF4BQ13523 1007 aaKnown RBP4.21□□□□□ -1.74
CLK1-203ENST00000409769 GPNMBQ14956 572 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 SF3B4Q15427 424 aaKnown RBP eCLIP4.21□□□□□ -1.742e-8■■■■■ 28
CLK1-203ENST00000409769 TPD52L1Q16890 204 aaPredicted RBP4.21□□□□□ -1.74
CLK1-203ENST00000409769 HSP90AA4PQ58FG1 418 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 C1orf220Q5T0J3 134 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 ATF7IP2Q5U623 682 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 ARMCX5Q6P1M9 558 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 PQLC2Q6ZP29 291 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 INTS8Q75QN2 995 aaKnown RBP4.21□□□□□ -1.74
CLK1-203ENST00000409769 GSTA5Q7RTV2 222 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 FAM228AQ86W67 206 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 CBWD2Q8IUF1 395 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 VSTM4Q8IW00 320 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 XXYLT1Q8NBI6 393 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 TANKQ92844 425 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 SLC35C1Q96A29 364 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 CPB2Q96IY4 423 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 ERGIC2Q96RQ1 377 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 TUBGCP2Q9BSJ2 902 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 XPO4Q9C0E2 1151 aaKnown RBP4.21□□□□□ -1.74
CLK1-203ENST00000409769 TRPV6Q9H1D0 765 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 SCPEP1Q9HB40 452 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 NOX4Q9NPH5 578 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 PCDHB16Q9NRJ7 776 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 AGPAT5Q9NUQ2 364 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 TAB2Q9NYJ8 693 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 C1RLQ9NZP8 487 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 SIX4Q9UIU6 781 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 TINAGQ9UJW2 476 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 CPSF3Q9UKF6 684 aaKnown RBP4.21□□□□□ -1.74
CLK1-203ENST00000409769 MROH7Q68CQ1 1323 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 ITIH6Q6UXX5 1313 aa4.21□□□□□ -1.74
CLK1-203ENST00000409769 A0A1W2PQF6 199 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 GTPBP10A4D1E9 387 aaKnown RBP4.2□□□□□ -1.74
CLK1-203ENST00000409769 GOLGA8IPA6NC78 632 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 GOLGA8JA6NMD2 632 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 LRRIQ3A6PVS8 624 aaPredicted RBP4.2□□□□□ -1.74
CLK1-203ENST00000409769 M0QZ92 97 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 SOCS6O14544 535 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 OGTO15294 1046 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 MID1O15344 667 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 P4HA2O15460 535 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 CLDN3O15551 220 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 RPS6KA5O75582 802 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 ERLIN2O94905 339 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 MCF2P10911 925 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 CDH2P19022 906 aaPredicted RBP4.2□□□□□ -1.74
CLK1-203ENST00000409769 TNFSF9P41273 254 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 ACOT2P49753 483 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 CCR9P51686 369 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 VAMP7P51809 220 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 CYP24A1Q07973 514 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 PSMD6Q15008 389 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 SNRNP35Q16560 246 aaKnown RBP4.2□□□□□ -1.74
CLK1-203ENST00000409769 KYAT1Q16773 422 aa4.2□□□□□ -1.74
CLK1-203ENST00000409769 DCAF4L1Q3SXM0 396 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 264.5 ms