RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CA9Q16790 459 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 MCMDC2Q4G0Z9 681 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 TMEM35AQ53FP2 167 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 NADSYN1Q6IA69 706 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 PRSS55Q6UWB4 352 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 BTNL8Q6UX41 500 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 PLXDC2Q6UX71 529 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 RAD9BQ6WBX8 426 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 ASB18Q6ZVZ8 466 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 PLEKHM3Q6ZWE6 761 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 ARMC9Q7Z3E5 817 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 PIGWQ7Z7B1 504 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 NUDT13Q86X67 352 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 TMEM219Q86XT9 240 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 CCDC83Q8IWF9 413 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 RASGEF1AQ8N9B8 481 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 THAP8Q8NA92 274 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 LILRB1Q8NHL6 650 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 LMO3Q8TAP4 145 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 ST7LQ8TDW4 575 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 PROX1Q92786 737 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 PKP4Q99569 1192 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 P2RY12Q9H244 342 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 RNPEPL1Q9HAU8 725 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 TMEM161AQ9NX61 479 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 SMARCAL1Q9NZC9 954 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 ZNF224Q9NZL3 707 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 TXNDC16Q9P2K2 825 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 SIX4Q9UIU6 781 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 OR2W1Q9Y3N9 320 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 MTF2Q9Y483 593 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 NOTCH4Q99466 2003 aa4.61□□□□□ -1.67
HMGB1P13-201ENST00000406019 C13orf42A0A1B0GVH6 325 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 C5orf51A6NDU8 294 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 PRSS44E7EML9 344 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 CTDSPLO15194 276 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 ZNHIT1O43257 154 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 KCNJ13O60928 360 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 RNASEH1O60930 286 aaKnown RBP4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 GLCEO94923 617 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 H1F0P07305 194 aaKnown RBP4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 ACP2P11117 423 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 MAPK3P27361 379 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 SERPINB6P35237 376 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 ARCN1P48444 511 aaKnown RBP4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 CASP9P55211 416 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 UCP2P55851 309 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 ISL1P61371 349 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 SEC61A1P61619 476 aaKnown RBP4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 NFATC4Q14934 902 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 CALCRLQ16602 461 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 UGT3A2Q3SY77 523 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 C9orf57Q5W0N0 161 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 C11orf63Q6NUN7 778 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 C16orf82Q7Z2V1 217 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 ANKRD33Q7Z3H0 272 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 DCP1BQ8IZD4 617 aaKnown RBP4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 HDDC3Q8N4P3 179 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 MRPL43Q8N983 215 aaKnown RBP4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 OR13J1Q8NGT2 312 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 RNASE8Q8TDE3 154 aaKnown RBP4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 MTBPQ96DY7 904 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 SGK494Q96LW2 274 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 PRAM1Q96QH2 718 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 PANX3Q96QZ0 392 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 OR1F2PQ96R84 312 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 ATG101Q9BSB4 218 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 TM6SF1Q9BZW5 370 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 AKIRIN1Q9H9L7 192 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 PROCRQ9UNN8 238 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 WDR83OSQ9Y284 106 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 DLGAP4Q9Y2H0 992 aa4.6□□□□□ -1.67
HMGB1P13-201ENST00000406019 A0A0G2JNG1 304 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 ILVBLA1L0T0 632 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 CTAGE9A4FU28 777 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 KRT87PA6NCN2 255 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 ZNF587BE7ETH6 402 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 LETM1O95202 739 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 PAPSS2O95340 614 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 SLC4A1P02730 911 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 CTAGE8P0CG41 777 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 FCGR1AP12314 374 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 HLA-DOBP13765 273 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 MYL6BP14649 208 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 CBLP22681 906 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 USP8P40818 1118 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 SERPINH1P50454 418 aaKnown RBP4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 LUMP51884 338 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 EEF1A2Q05639 463 aaKnown RBP4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 ARHGAP1Q07960 439 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 SLC20A2Q08357 652 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 GTF2H2Q13888 395 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 KIR2DS5Q14953 304 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 ELFN2Q5R3F8 820 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 PRAMEF8Q5VWM4 474 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 ETFRF1Q6IPR1 90 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 GTF2H2CQ6P1K8 395 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 PRSS57Q6UWY2 283 aa4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 DHX29Q7Z478 1369 aaKnown RBP4.59□□□□□ -1.67
HMGB1P13-201ENST00000406019 PRSS42Q7Z5A4 293 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms