RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 CHRNA10Q9GZZ6 450 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 LRRC4CQ9HCJ2 640 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ABCF3Q9NUQ8 709 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CORO1CQ9ULV4 474 aaPredicted RBP13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PCDHB3Q9Y5E6 796 aa13.55□□□□□ -0.24
HLA-DQB1-202ENST00000399079 FAM95CA0A1B0GW59 222 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 E7ENX8 843 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 E7EQ34 232 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 TERTO14746 1132 aaKnown RBP13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 NKX2-8O15522 239 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ZNF749O43361 778 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 OR2B3O76000 313 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MT-ND3P03897 115 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 IL2P60568 153 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 TAP2Q03519 686 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ARHGAP19Q14CB8 494 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PCSK4Q6UW60 755 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SYTL1Q8IYJ3 562 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 GPR135Q8IZ08 494 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MYO1HQ8N1T3 1032 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CT55Q8WUE5 264 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SMPDL3AQ92484 453 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CLIP3Q96DZ5 547 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 VPS39Q96JC1 886 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SLC45A3Q96JT2 553 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PHACTR1Q9C0D0 580 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ACTR5Q9H9F9 607 aaPredicted RBP13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PDE10AQ9Y233 779 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 BOD1L1Q8NFC6 3051 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 FAM159BA6NKW6 160 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MEN1O00255 615 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CTSVO60911 334 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ATXN8OSP0DMR3 200 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PRKAR1AP10644 381 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 IMPA1P29218 277 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 TAS2R39P59534 338 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PHKG1Q16816 387 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 KBTBD12Q3ZCT8 623 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SOWAHCQ53LP3 525 aaPredicted RBP13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ATP1A1-AS1Q5TC04 95 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 LRRC8EQ6NSJ5 796 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CEP97Q8IW35 865 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 LRRC56Q8IYG6 542 aaPredicted RBP13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MCOLN3Q8TDD5 553 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 STARD8Q92502 1023 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 TTC9Q92623 222 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 EXTL1Q92935 676 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MR1Q95460 341 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 DPH7Q9BTV6 452 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SLC7A5P2Q9GIP4 190 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 RHOJQ9H4E5 214 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PCMTD2Q9NV79 361 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 IRAK4Q9NWZ3 460 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 NSMCE4AQ9NXX6 385 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 EURLQ9NYK6 297 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 TAC3Q9UHF0 121 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 IKZF3Q9UKT9 509 aa13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MTO1Q9Y2Z2 717 aaKnown RBP13.54□□□□□ -0.24
HLA-DQB1-202ENST00000399079 KALRNO60229 2985 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CACNA1GO43497 2377 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 IGKV1-8A0A0C4DH67 115 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 KATNA1O75449 491 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 C8GP07360 202 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ZNF37AP17032 561 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 RPA3P35244 121 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 RORAP35398 523 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 RHDQ02161 417 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PTCHD3Q3KNS1 767 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 UBAP2Q5T6F2 1119 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ZNF517Q6ZMY9 492 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CYS1Q717R9 158 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 MCATQ8IVS2 390 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CTAGE3PQ8IX95 158 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 DSELQ8IZU8 1212 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ZNF655Q8N720 491 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 FBF1Q8TES7 1133 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 IFT81Q8WYA0 676 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CDKL2Q92772 493 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ZUFSPQ96AP4 578 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 UBL7Q96S82 380 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CHST8Q9H2A9 424 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 CAB39LQ9H9S4 337 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PARVBQ9HBI1 364 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 SLC6A20Q9NP91 592 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 STARD5Q9NSY2 213 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 INTS7Q9NVH2 962 aaKnown RBP13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 STOX2Q9P2F5 926 aaPredicted RBP13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PLCL2Q9UPR0 1127 aa13.53□□□□□ -0.24
HLA-DQB1-202ENST00000399079 PIEZO2Q9H5I5 2752 aa13.52□□□□□ -0.24
HLA-DQB1-202ENST00000399079 ATRXP46100 2492 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 TARM1B6A8C7 271 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ERVH48-1M5A8F1 160 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 ZSCAN9O15535 394 aaPredicted RBP13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 FAM155BO75949 473 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 KLK3P07288 261 aaPredicted RBP13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 GSTA2P09210 222 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 CMPK1P30085 196 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 HSD17B2P37059 387 aa13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 RPS18P62269 152 aaKnown RBP13.52□□□□□ -0.25
HLA-DQB1-202ENST00000399079 SP140Q13342 867 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms