RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 A0A1W2PPV9 198 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 E7EQ34 232 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 SRPX2O60687 465 aaPredicted RBP13.74□□□□□ -0.21
HDDC2-202ENST00000398153 KLK3P07288 261 aaPredicted RBP13.74□□□□□ -0.21
HDDC2-202ENST00000398153 PVRP15151 417 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 ZNF28P17035 718 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 MAGP20916 626 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 HRH2P25021 359 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 RPA3P35244 121 aaPredicted RBP13.74□□□□□ -0.21
HDDC2-202ENST00000398153 GABRA4P48169 554 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 MC1RQ01726 317 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 PRDX1Q06830 199 aaKnown RBP13.74□□□□□ -0.21
HDDC2-202ENST00000398153 ZIC1Q15915 447 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 KBTBD12Q3ZCT8 623 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 YOD1Q5VVQ6 348 aaPredicted RBP13.74□□□□□ -0.21
HDDC2-202ENST00000398153 TLDC1Q6P9B6 456 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 FIGLAQ6QHK4 219 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 ZNF517Q6ZMY9 492 aaPredicted RBP13.74□□□□□ -0.21
HDDC2-202ENST00000398153 CCDC91Q7Z6B0 441 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 CTAGE3PQ8IX95 158 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 SYTL1Q8IYJ3 562 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 FBF1Q8TES7 1133 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 ATL1Q8WXF7 558 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 IFT81Q8WYA0 676 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 SLC45A3Q96JT2 553 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 CYTH2Q99418 400 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 GPR22Q99680 433 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 GPR87Q9BY21 358 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 FUT8Q9BYC5 575 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 L2HGDHQ9H9P8 463 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 FAM60AQ9NP50 221 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 LHX9Q9NQ69 397 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 CIDEBQ9UHD4 219 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 TSR3Q9UJK0 312 aaKnown RBP13.74□□□□□ -0.21
HDDC2-202ENST00000398153 KCND3Q9UK17 655 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 PDE10AQ9Y233 779 aa13.74□□□□□ -0.21
HDDC2-202ENST00000398153 CXorf49A8MYA2 514 aaPredicted RBP13.73□□□□□ -0.21
HDDC2-202ENST00000398153 C21orf140B9A014 251 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 EFSO43281 561 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 OR2B3O76000 313 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 TIAF1O95411 115 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 SYF2O95926 243 aaKnown RBP13.73□□□□□ -0.21
HDDC2-202ENST00000398153 STMN1P16949 149 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 GRIA3P42263 894 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 TAS2R39P59534 338 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 RHDQ02161 417 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 FASTKQ14296 549 aaKnown RBP13.73□□□□□ -0.21
HDDC2-202ENST00000398153 SLMAPQ14BN4 828 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 TCTE1Q5JU00 501 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 KIAA1614Q5VZ46 1190 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 TRIM73Q86UV7 250 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 LRRC56Q8IYG6 542 aaPredicted RBP13.73□□□□□ -0.21
HDDC2-202ENST00000398153 CNPY4Q8N129 248 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 C2orf73Q8N5S3 287 aaPredicted RBP13.73□□□□□ -0.21
HDDC2-202ENST00000398153 EIF1ADQ8N9N8 165 aaKnown RBP13.73□□□□□ -0.21
HDDC2-202ENST00000398153 GALNT6Q8NCL4 622 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 LSM14AQ8ND56 463 aaKnown RBP13.73□□□□□ -0.21
HDDC2-202ENST00000398153 OR1L3Q8NH93 324 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 DLG3Q92796 817 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 KLHL25Q9H0H3 589 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 GPN2Q9H9Y4 310 aaPredicted RBP13.73□□□□□ -0.21
HDDC2-202ENST00000398153 CPNE5Q9HCH3 593 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 GPAMQ9HCL2 828 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 MRPS30Q9NP92 439 aaKnown RBP13.73□□□□□ -0.21
HDDC2-202ENST00000398153 SRPK3Q9UPE1 567 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 PCDHGA6Q9Y5G7 932 aa13.73□□□□□ -0.21
HDDC2-202ENST00000398153 PTPRQQ9UMZ3 2332 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 H3BMH7 237 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 KRT37O76014 449 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 NTRK1P04629 796 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 CD63P08962 238 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 LIFP15018 202 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 IMPA1P29218 277 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 ECHS1P30084 290 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 SLC26A3P40879 764 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 ARSFP54793 590 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 CDKL1Q00532 357 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 USP10Q14694 798 aaKnown RBP13.72□□□□□ -0.21
HDDC2-202ENST00000398153 ICE2Q659A1 982 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 FCRL6Q6DN72 434 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 RHBDD2Q6NTF9 364 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 ADAMTSL2Q86TH1 951 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 TAX1BP1Q86VP1 789 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 PPM1NQ8N819 430 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 WBP1Q96G27 269 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 ZNF285Q96NJ3 590 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 MIPEPQ99797 713 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 C17orf62Q9BQA9 187 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 SLC7A5P2Q9GIP4 190 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 DERL2Q9GZP9 239 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 ACSS3Q9H6R3 686 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 ACTR5Q9H9F9 607 aaPredicted RBP13.72□□□□□ -0.21
HDDC2-202ENST00000398153 CCDC177Q9NQR7 707 aaPredicted RBP13.72□□□□□ -0.21
HDDC2-202ENST00000398153 EURLQ9NYK6 297 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 STOX2Q9P2F5 926 aaPredicted RBP13.72□□□□□ -0.21
HDDC2-202ENST00000398153 ADAMTS6Q9UKP5 1117 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 SNX7Q9UNH6 387 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 MTO1Q9Y2Z2 717 aaKnown RBP13.72□□□□□ -0.21
HDDC2-202ENST00000398153 PCDHGA4Q9Y5G9 962 aa13.72□□□□□ -0.21
HDDC2-202ENST00000398153 LOC101059948A0A1B0GTJ6 334 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms