RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 A0A1W2PPV9 198 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 GOLGA8OA6NCC3 632 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 ERICH4A6NGS2 130 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 GOLGA8NF8WBI6 632 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 KIR2DS3K7RE56 304 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 FCHO1O14526 889 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 HGSO14964 777 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 HRO43593 1189 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 KDM1AO60341 852 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 CTSEP14091 401 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 CSNK1EP49674 416 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 CHIT1Q13231 466 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 KIR2DS5Q14953 304 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 GALNTL6Q49A17 601 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 SLCO4C1Q6ZQN7 724 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 SDR16C5Q8N3Y7 309 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 RAB42Q8N4Z0 105 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 LINC01555Q8NAE3 123 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 OR52E1Q8NGJ3 308 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 USP7Q93009 1102 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 ERP27Q96DN0 273 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 HAUS8Q9BT25 410 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 PCBD2Q9H0N5 130 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 ERVMER34-1Q9H9K5 563 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 PFDN4Q9NQP4 134 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 ICKQ9UPZ9 632 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 ARID1BQ8NFD5 2236 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 MDC1Q14676 2089 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 A0A1B0GTW7 788 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 PRR5-ARHGAP8B1AHC4 643 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 E7EQ34 232 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 CLGNO14967 610 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 VPS4BO75351 444 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 PRR35P0CG20 571 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 SLC2A4P14672 509 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 JUPP14923 745 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 CD22P20273 847 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 CNR2P34972 360 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 HNF4AP41235 474 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 UBE2IP63279 158 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 SRSF5Q13243 272 aaKnown RBP18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 ELOCQ15369 112 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 TCEA2Q15560 299 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 PRRT3Q5FWE3 981 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 TCHHL1Q5QJ38 904 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 PRAMEF14Q5SWL7 426 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 PRAMEF13Q5VWM6 474 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 PEAR1Q5VY43 1037 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 CHSY3Q70JA7 882 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 TAF8Q7Z7C8 310 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 LMNTD1Q8N9Z9 388 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 NEIL2Q969S2 332 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 PPP1R36Q96LQ0 422 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 NRTNQ99748 197 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 ZNF385DQ9H6B1 395 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 SLC40A1Q9NP59 571 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 SAR1AQ9NR31 198 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 ZFP69BQ9UJL9 534 aa18.84■□□□□ 0.61
PDLIM2-205ENST00000397761 PRAMEF33A0A0G2JMD5 474 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 SERTM1A2A2V5 107 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 MANBAO00462 879 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 HMOX2P30519 316 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 ARL1P40616 181 aaPredicted RBP18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 HTR6P50406 440 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 IRF8Q02556 426 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 ZNF33BQ06732 778 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 DOC2AQ14183 400 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 KRT33BQ14525 404 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 TEAD4Q15561 434 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 GRHL2Q6ISB3 625 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 SUSD1Q6UWL2 747 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 NAGSQ8N159 534 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 SFRP1Q8N474 314 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 CXorf40BQ96DE9 158 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 PRR11Q96HE9 360 aaPredicted RBP18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 POT1Q9NUX5 634 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 SPASTQ9UBP0 616 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 PILRBQ9UKJ0 227 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 TRIM33Q9UPN9 1127 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 SH2B3Q9UQQ2 575 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 BTRCQ9Y297 605 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 CCL27Q9Y4X3 112 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 PTGDR2Q9Y5Y4 395 aa18.83■□□□□ 0.6
PDLIM2-205ENST00000397761 ADAMTS9Q9P2N4 1935 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 E9PBE3 544 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 H0YIV9 168 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 PRICKLE3O43900 615 aaPredicted RBP18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 KLHL41O60662 606 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 KRT6AP02538 564 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 KRT6BP04259 564 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 LINC00032P0C843 101 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 SHMT2P34897 504 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 CTSKP43235 329 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 KRT6CP48668 564 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 DHPSP49366 369 aaPredicted RBP18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 C21orf59P57076 290 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 HNRNPKP61978 463 aaKnown RBP eCLIP18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 XKR6Q5GH73 641 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 ATG9BQ674R7 924 aa18.82■□□□□ 0.6
PDLIM2-205ENST00000397761 OGFOD2Q6N063 350 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms