RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 C5orf67F2Z3F1 127 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 H0YAE9 185 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 CXCR6O00574 342 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 TSPAN6O43657 245 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 TLL1O43897 1013 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 MT-ND1P03886 318 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 ELFN1P0C7U0 828 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 ADH5P11766 374 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 TACR1P25103 407 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 MAP4P27816 1152 aaKnown RBP16.31■□□□□ 0.2
NUP50-202ENST00000396096 IRS1P35568 1242 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 CTSCP53634 463 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 C21orf58P58505 322 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 ADARB1P78563 741 aaKnown RBP16.31■□□□□ 0.2
NUP50-202ENST00000396096 CAMK1Q14012 370 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 DPY19L1Q2PZI1 675 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 GTDC1Q4AE62 458 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 SYTL3Q4VX76 610 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 ZNF648Q5T619 568 aaPredicted RBP16.31■□□□□ 0.2
NUP50-202ENST00000396096 NOXRED1Q6NXP6 359 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 PARS2Q7L3T8 475 aaKnown RBP16.31■□□□□ 0.2
NUP50-202ENST00000396096 GPR149Q86SP6 731 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 NLRP8Q86W28 1048 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 THOC6Q86W42 341 aaKnown RBP16.31■□□□□ 0.2
NUP50-202ENST00000396096 TMEM132CQ8N3T6 1108 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 PHOSPHO2Q8TCD6 241 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 TMEM159Q96B96 161 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 COQ10AQ96MF6 247 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 LRRC3BQ96PB8 259 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 CARS2Q9HA77 564 aaKnown RBP16.31■□□□□ 0.2
NUP50-202ENST00000396096 SLC6A13Q9NSD5 602 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 THEGQ9P2T0 379 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 ADGRE2Q9UHX3 823 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 V9GYQ6 96 aa16.31■□□□□ 0.2
NUP50-202ENST00000396096 MUC22E2RYF6 1773 aaPredicted RBP16.3■□□□□ 0.2
NUP50-202ENST00000396096 H0Y858 1186 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 WNT9AO14904 365 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 HPRP00739 348 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 CATP04040 527 aaKnown RBP16.3■□□□□ 0.2
NUP50-202ENST00000396096 HSD3B1P14060 373 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 NELFEP18615 380 aaKnown RBP16.3■□□□□ 0.2
NUP50-202ENST00000396096 CD22P20273 847 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 HSD3B2P26439 372 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 IRF8Q02556 426 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 TMEM115Q12893 351 aaPredicted RBP16.3■□□□□ 0.2
NUP50-202ENST00000396096 ZNF658BQ4V348 819 aaPredicted RBP16.3■□□□□ 0.2
NUP50-202ENST00000396096 GRHL2Q6ISB3 625 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 TBPL2Q6SJ96 375 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 DNAJC14Q6Y2X3 702 aaPredicted RBP16.3■□□□□ 0.2
NUP50-202ENST00000396096 PATL1Q86TB9 770 aaKnown RBP16.3■□□□□ 0.2
NUP50-202ENST00000396096 SLC22A15Q8IZD6 547 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 TRIML2Q8N7C3 387 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 MAGEE2Q8TD90 523 aaPredicted RBP16.3■□□□□ 0.2
NUP50-202ENST00000396096 ADAMTS16Q8TE57 1224 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 ING5Q8WYH8 240 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 AP2M1Q96CW1 435 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 TSSK3Q96PN8 268 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 MAGIXQ9H6Y5 334 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 SPATA6Q9NWH7 488 aaPredicted RBP16.3■□□□□ 0.2
NUP50-202ENST00000396096 STOX2Q9P2F5 926 aaPredicted RBP16.3■□□□□ 0.2
NUP50-202ENST00000396096 DNAJB9Q9UBS3 223 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 PCDHGA11Q9Y5H2 935 aa16.3■□□□□ 0.2
NUP50-202ENST00000396096 KRT87PA6NCN2 255 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 H0YIV9 168 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 ADH1CP00326 375 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 ETS2P15036 469 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 PRPS1L1P21108 318 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 HNF4AP41235 474 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 TRPC1P48995 793 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 ALDH3A2P51648 485 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 ABHD18Q0P651 414 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 ABRQ12979 859 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 E2F2Q14209 437 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 ACOX1Q15067 660 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 PSRC1Q6PGN9 363 aaPredicted RBP16.29■□□□□ 0.2
NUP50-202ENST00000396096 TTC33Q6PID6 262 aaPredicted RBP16.29■□□□□ 0.2
NUP50-202ENST00000396096 AGTRAPQ6RW13 159 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 ENPP6Q6UWR7 440 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 B3GNT6Q6ZMB0 384 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 FBXO15Q8NCQ5 510 aaPredicted RBP16.29■□□□□ 0.2
NUP50-202ENST00000396096 OR56A3Q8NH54 315 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 CYGBQ8WWM9 190 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 BADQ92934 168 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 TMBIM1Q969X1 311 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 DTD2Q96FN9 168 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 APOLD1Q96LR9 279 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 YTHDF1Q9BYJ9 559 aaKnown RBP16.29■□□□□ 0.2
NUP50-202ENST00000396096 DCAF13Q9NV06 445 aaKnown RBP16.29■□□□□ 0.2
NUP50-202ENST00000396096 WBP1LQ9NX94 342 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 MRPS23Q9Y3D9 190 aaKnown RBP16.29■□□□□ 0.2
NUP50-202ENST00000396096 CEPT1Q9Y6K0 416 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 LRRK1Q38SD2 2015 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 A0A087WXM4 84 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 LINC01553A4QN01 128 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 PER2O15055 1255 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 NPC1O15118 1278 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 SPINT1O43278 529 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 ARSFP54793 590 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 ST8SIA6P61647 398 aa16.29■□□□□ 0.2
NUP50-202ENST00000396096 DAG1Q14118 895 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms