RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 CDKN2CP42773 168 aa14.62□□□□□ -0.07
GPC3-202ENST00000394299 ELP6Q0PNE2 266 aa14.62□□□□□ -0.07
GPC3-202ENST00000394299 FOXB2Q5VYV0 432 aa14.62□□□□□ -0.07
GPC3-202ENST00000394299 FAM83HQ6ZRV2 1179 aaPredicted RBP14.62□□□□□ -0.07
GPC3-202ENST00000394299 RNF165Q6ZSG1 346 aa14.62□□□□□ -0.07
GPC3-202ENST00000394299 TRMT11Q7Z4G4 463 aaKnown RBP14.62□□□□□ -0.07
GPC3-202ENST00000394299 CHCHD4Q8N4Q1 142 aa14.62□□□□□ -0.07
GPC3-202ENST00000394299 CCDC138Q96M89 665 aa14.62□□□□□ -0.07
GPC3-202ENST00000394299 EFHD1Q9BUP0 239 aa14.62□□□□□ -0.07
GPC3-202ENST00000394299 VCXQ9H320 206 aa14.62□□□□□ -0.07
GPC3-202ENST00000394299 TM7SF3Q9NS93 570 aa14.62□□□□□ -0.07
GPC3-202ENST00000394299 GPRC5BQ9NZH0 403 aa14.62□□□□□ -0.07
GPC3-202ENST00000394299 SERGEFQ9UGK8 458 aa14.62□□□□□ -0.07
GPC3-202ENST00000394299 IGLON5A6NGN9 336 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 C1orf105O95561 183 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 EFNA1P20827 205 aaPredicted RBP14.61□□□□□ -0.07
GPC3-202ENST00000394299 PSMA4P25789 261 aaKnown RBP14.61□□□□□ -0.07
GPC3-202ENST00000394299 HTR1EP28566 365 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 INPP5AQ14642 412 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 EIF4HQ15056 248 aaKnown RBP14.61□□□□□ -0.07
GPC3-202ENST00000394299 PDGFRLQ15198 375 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 PYCR3Q53H96 274 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 CATSPEREQ5SY80 951 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 ZBTB49Q6ZSB9 765 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 CATSPER1Q8NEC5 780 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 CDC26Q8NHZ8 85 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 WDR20Q8TBZ3 569 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 ZNF480Q8WV37 535 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 NEIL2Q969S2 332 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 CENPKQ9BS16 269 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 TMEM45AQ9NWC5 275 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 THAP10Q9P2Z0 257 aaPredicted RBP14.61□□□□□ -0.07
GPC3-202ENST00000394299 PCDHB14Q9Y5E9 798 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 C15orf38-AP3S2A0A0A6YYH1 394 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 A0A1B0GTW7 788 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 DYTNA2CJ06 578 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 PLOD2O00469 737 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 MID1O15344 667 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 NPPAP01160 153 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 IL10P22301 178 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 GDI1P31150 447 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 GRIA2P42262 883 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 CLDN8P56748 225 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 STARD3Q14849 445 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 ANKRD26P1Q6NSI1 321 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 NOXRED1Q6NXP6 359 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 TTC23LQ6PF05 361 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 IYDQ6PHW0 289 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.61□□□□□ -0.07
GPC3-202ENST00000394299 ARPINQ7Z6K5 226 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 EPHX4Q8IUS5 362 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 SYTL1Q8IYJ3 562 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 KLK6Q92876 244 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 CMTM7Q96FZ5 175 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 TRIM15Q9C019 465 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 TRIM39Q9HCM9 518 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 SLC23A2Q9UGH3 650 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 CDH7Q9ULB5 785 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 PLAGL1Q9UM63 463 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 FADS3Q9Y5Q0 445 aa14.61□□□□□ -0.07
GPC3-202ENST00000394299 KIF26AQ9ULI4 1882 aaPredicted RBP14.61□□□□□ -0.07
GPC3-202ENST00000394299 DOCK8Q8NF50 2099 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 MAGEB17A8MXT2 336 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 QSOX1O00391 747 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 PCCBP05166 539 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 IL6P05231 212 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 DRD3P35462 400 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 SEC13P55735 322 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 MEF2AQ02078 507 aaPredicted RBP14.6□□□□□ -0.07
GPC3-202ENST00000394299 FCHO2Q0JRZ9 810 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 SMU1Q2TAY7 513 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 PIP5KL1Q5T9C9 394 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 OR4F3Q6IEY1 312 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 AADATQ8N5Z0 425 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 FAM86B1Q8N7N1 296 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 TRPV3Q8NET8 790 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 OR7A2PQ8NGA2 310 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 CXorf40AQ8TE69 158 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 FIG4Q92562 907 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 IL17FQ96PD4 163 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 CARS2Q9HA77 564 aaKnown RBP14.6□□□□□ -0.07
GPC3-202ENST00000394299 TRPV4Q9HBA0 871 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 SGK2Q9HBY8 427 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 SERHLQ9NQF3 203 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 AGPAT4Q9NRZ5 378 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 ASIC5Q9NY37 505 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 RAB26Q9ULW5 256 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 ERVK-11Q9UQG0 969 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 CFAP20Q9Y6A4 193 aaKnown RBP14.6□□□□□ -0.07
GPC3-202ENST00000394299 PCNAP12004 261 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 BMP2P12643 396 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 PAX7P23759 505 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 S100A3P33764 101 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 CHN2P52757 468 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 TAS2R38P59533 333 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 HYAL1Q12794 435 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 TMEM52BQ4KMG9 183 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 LIPJQ5W064 366 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 GCNT7Q6ZNI0 430 aa14.6□□□□□ -0.07
GPC3-202ENST00000394299 C11orf96Q7Z7L8 435 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms