RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 DPY30Q9C005 99 aa21.5■■□□□ 1.03
HMGA2-203ENST00000393578 TM7SF3Q9NS93 570 aa21.5■■□□□ 1.03
HMGA2-203ENST00000393578 NCKAP1Q9Y2A7 1128 aa21.5■■□□□ 1.03
HMGA2-203ENST00000393578 NME4O00746 187 aa21.5■■□□□ 1.03
HMGA2-203ENST00000393578 BCKDHAP12694 445 aa21.5■■□□□ 1.03
HMGA2-203ENST00000393578 GLULP15104 373 aa21.5■■□□□ 1.03
HMGA2-203ENST00000393578 ACPPP15309 386 aa21.5■■□□□ 1.03
HMGA2-203ENST00000393578 CAPRIN1Q14444 709 aaKnown RBP21.5■■□□□ 1.03
HMGA2-203ENST00000393578 ZFP1Q6P2D0 407 aa21.5■■□□□ 1.03
HMGA2-203ENST00000393578 PLCD3Q8N3E9 789 aa21.5■■□□□ 1.03
HMGA2-203ENST00000393578 TFGQ92734 400 aaPredicted RBP21.5■■□□□ 1.03
HMGA2-203ENST00000393578 RAD51AP1Q96B01 352 aa21.5■■□□□ 1.03
HMGA2-203ENST00000393578 LRRC42Q9Y546 428 aa21.5■■□□□ 1.03
HMGA2-203ENST00000393578 PCDHGA11Q9Y5H2 935 aa21.5■■□□□ 1.03
HMGA2-203ENST00000393578 H3BNX3 289 aa21.49■■□□□ 1.03
HMGA2-203ENST00000393578 RPN2P04844 631 aa21.49■■□□□ 1.03
HMGA2-203ENST00000393578 PRPS2P11908 318 aa21.49■■□□□ 1.03
HMGA2-203ENST00000393578 NPPBP16860 134 aa21.49■■□□□ 1.03
HMGA2-203ENST00000393578 MAPK1P28482 360 aa21.49■■□□□ 1.03
HMGA2-203ENST00000393578 PNLIPRP1P54315 467 aa21.49■■□□□ 1.03
HMGA2-203ENST00000393578 TAP2Q03519 686 aa21.49■■□□□ 1.03
HMGA2-203ENST00000393578 SFSWAPQ12872 951 aaKnown RBP21.49■■□□□ 1.03
HMGA2-203ENST00000393578 SUSD1Q6UWL2 747 aa21.49■■□□□ 1.03
HMGA2-203ENST00000393578 SLCO4C1Q6ZQN7 724 aa21.49■■□□□ 1.03
HMGA2-203ENST00000393578 DHDDSQ86SQ9 333 aa21.49■■□□□ 1.03
HMGA2-203ENST00000393578 DCUN1D3Q8IWE4 304 aa21.49■■□□□ 1.03
HMGA2-203ENST00000393578 LRRC56Q8IYG6 542 aaPredicted RBP21.49■■□□□ 1.03
HMGA2-203ENST00000393578 NEIL2Q969S2 332 aa21.49■■□□□ 1.03
HMGA2-203ENST00000393578 RMI1Q9H9A7 625 aa21.49■■□□□ 1.03
HMGA2-203ENST00000393578 KELP23276 732 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 DMPKQ09013 629 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 FBXO43Q4G163 708 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 PRR23BQ6ZRT6 265 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 ASB12Q8WXK4 309 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 MRGPRX1Q96LB2 322 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 UHRF1Q96T88 793 aaPredicted RBP21.48■■□□□ 1.03
HMGA2-203ENST00000393578 PCDHAC1Q9H158 963 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 ACSL5Q9ULC5 683 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 PCDHA9Q9Y5H5 950 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 DOCK9Q9BZ29 2069 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 NVLO15381 856 aaKnown RBP21.48■■□□□ 1.03
HMGA2-203ENST00000393578 IL6P05231 212 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 HSD3B1P14060 373 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 HSD17B1P14061 328 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 HSD3B2P26439 372 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 IGFALSP35858 605 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 SMAD4Q13485 552 aaKnown RBP21.48■■□□□ 1.03
HMGA2-203ENST00000393578 NUMA1Q14980 2115 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 EOGTQ5NDL2 527 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 OR5AR1Q8NGP9 310 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 WDR34Q96EX3 536 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 CLMPQ9H6B4 373 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 BRF2Q9HAW0 419 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 SPATA6Q9NWH7 488 aaPredicted RBP21.48■■□□□ 1.03
HMGA2-203ENST00000393578 NMRK1Q9NWW6 199 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 CMTM6Q9NX76 183 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 SLC17A4Q9Y2C5 497 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 DYRK1BQ9Y463 629 aa21.48■■□□□ 1.03
HMGA2-203ENST00000393578 EYSQ5T1H1 3165 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 ACADMP11310 421 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 AMD1P17707 334 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 MAT2AP31153 395 aaKnown RBP21.47■■□□□ 1.03
HMGA2-203ENST00000393578 DGKQP52824 942 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 IER5LQ5T953 404 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 SLC2A7Q6PXP3 512 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 RNF111Q6ZNA4 994 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 PHC3Q8NDX5 983 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 OR5K2Q8NHB8 316 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 RPLP0P6Q8NHW5 317 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 TMEM125Q96AQ2 219 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 EHD1Q9H4M9 534 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 SGK2Q9HBY8 427 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 CCDC177Q9NQR7 707 aaPredicted RBP21.47■■□□□ 1.03
HMGA2-203ENST00000393578 VPS29Q9UBQ0 182 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 PSMD13Q9UNM6 376 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 DLGAP4Q9Y2H0 992 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 C15orf38-AP3S2A0A0A6YYH1 394 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 MBTPS2O43462 519 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 PI15O43692 258 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 FUCA1P04066 466 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 CEACAM5P06731 702 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 SLC35G4P0C7Q5 338 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 ATXN3P54252 364 aaPredicted RBP21.47■■□□□ 1.03
HMGA2-203ENST00000393578 CLDN8P56748 225 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 MRPS22P82650 360 aaKnown RBP21.47■■□□□ 1.03
HMGA2-203ENST00000393578 C6orf10Q5SRN2 563 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 SWT1Q5T5J6 900 aaKnown RBP21.47■■□□□ 1.03
HMGA2-203ENST00000393578 ARPINQ7Z6K5 226 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 KIAA2013Q8IYS2 634 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 DNAJB14Q8TBM8 379 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 SETD7Q8WTS6 366 aaKnown RBP21.47■■□□□ 1.03
HMGA2-203ENST00000393578 APIPQ96GX9 242 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 MSANTD3Q96H12 275 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 METTL2AQ96IZ6 378 aaKnown RBP21.47■■□□□ 1.03
HMGA2-203ENST00000393578 MTERF1Q99551 399 aaKnown RBP21.47■■□□□ 1.03
HMGA2-203ENST00000393578 TIMM29Q9BSF4 260 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 SLAMF8Q9P0V8 285 aa21.47■■□□□ 1.03
HMGA2-203ENST00000393578 ARHGAP19Q14CB8 494 aa21.46■■□□□ 1.03
HMGA2-203ENST00000393578 MUM1Q2TAK8 710 aa21.46■■□□□ 1.03
HMGA2-203ENST00000393578 FAM174BQ3ZCQ3 159 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms