RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 MAATS1Q7Z4T9 603 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 GALNT7Q86SF2 657 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 MCATQ8IVS2 390 aaKnown RBP8.6□□□□□ -1.03
TRBV27-201ENST00000390399 ZNF655Q8N720 491 aaPredicted RBP8.6□□□□□ -1.03
TRBV27-201ENST00000390399 ENDOVQ8N8Q3 282 aaKnown RBP8.6□□□□□ -1.03
TRBV27-201ENST00000390399 FBXO36Q8NEA4 188 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 OR2L3Q8NG85 312 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 PROKR1Q8TCW9 393 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 APOBEC4Q8WW27 367 aaKnown RBP8.6□□□□□ -1.03
TRBV27-201ENST00000390399 ASB11Q8WXH4 323 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 SMPDL3AQ92484 453 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 ZUFSPQ96AP4 578 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 PKP4Q99569 1192 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 DPH2Q9BQC3 489 aaPredicted RBP8.6□□□□□ -1.03
TRBV27-201ENST00000390399 NDC1Q9BTX1 674 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 NLNQ9BYT8 704 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 FAM117AQ9C073 453 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 DPH5Q9H2P9 285 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 TXLNGQ9NUQ3 528 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 GEMIN8Q9NWZ8 242 aaKnown RBP8.6□□□□□ -1.03
TRBV27-201ENST00000390399 TAS2R13Q9NYV9 303 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 CORO1CQ9ULV4 474 aaPredicted RBP8.6□□□□□ -1.03
TRBV27-201ENST00000390399 SNX7Q9UNH6 387 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 FARSAQ9Y285 508 aaKnown RBP8.6□□□□□ -1.03
TRBV27-201ENST00000390399 MAN2B2Q9Y2E5 1009 aa8.6□□□□□ -1.03
TRBV27-201ENST00000390399 TARM1B6A8C7 271 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 E7ESA3 106 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 GFYI3L273 518 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 ZBTB14O43829 449 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 CCNDBP1O95273 360 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 SLC16A8O95907 504 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 ATXN8OSP0DMR3 200 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 HSD17B2P37059 387 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 SKIV2L2P42285 1042 aaKnown RBP8.59□□□□□ -1.03
TRBV27-201ENST00000390399 PNLIPRP1P54315 467 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 CDKN2DP55273 166 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 TIAL1Q01085 375 aaKnown RBP eCLIP8.59□□□□□ -1.03
TRBV27-201ENST00000390399 MGAT5Q09328 741 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 PDAP1Q13442 181 aaKnown RBP8.59□□□□□ -1.03
TRBV27-201ENST00000390399 IL10RAQ13651 578 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 FRG1Q14331 258 aaKnown RBP8.59□□□□□ -1.03
TRBV27-201ENST00000390399 FASTKD3Q14CZ7 662 aaKnown RBP8.59□□□□□ -1.03
TRBV27-201ENST00000390399 NCF4Q15080 339 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 TCTE1Q5JU00 501 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 HECTD2Q5U5R9 776 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 ZNF385CQ66K41 422 aaPredicted RBP8.59□□□□□ -1.03
TRBV27-201ENST00000390399 FAM45BPQ6NSW5 357 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 SUSD1Q6UWL2 747 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 CYHR1Q6ZMK1 362 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 ZBED8Q8IZ13 594 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 MYO1HQ8N1T3 1032 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 GPATCH11Q8N954 259 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 TTC29Q8NA56 475 aaPredicted RBP8.59□□□□□ -1.03
TRBV27-201ENST00000390399 FBXO15Q8NCQ5 510 aaPredicted RBP8.59□□□□□ -1.03
TRBV27-201ENST00000390399 PPFIBP2Q8ND30 876 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 OR2A1Q8NGT9 310 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 FAM45AQ8TCE6 357 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 EEF1AKMT1Q8WVE0 214 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 DLG3Q92796 817 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 LINGO1Q96FE5 620 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 GBP5Q96PP8 586 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 C17orf62Q9BQA9 187 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 SELENOSQ9BQE4 189 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 ERP44Q9BS26 406 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 ACAT2Q9BWD1 397 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 SLC25A18Q9H1K4 315 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 SLC6A20Q9NP91 592 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 MRPS30Q9NP92 439 aaKnown RBP8.59□□□□□ -1.03
TRBV27-201ENST00000390399 STARD5Q9NSY2 213 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 ABCF3Q9NUQ8 709 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 WHRNQ9P202 907 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 ZFATQ9P243 1243 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 DHCR7Q9UBM7 475 aaKnown RBP8.59□□□□□ -1.03
TRBV27-201ENST00000390399 GPN3Q9UHW5 284 aaPredicted RBP8.59□□□□□ -1.03
TRBV27-201ENST00000390399 TUBD1Q9UJT1 453 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 TCFL5Q9UL49 500 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 PADI2Q9Y2J8 665 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 KLK4Q9Y5K2 254 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 KCNMB2Q9Y691 235 aa8.59□□□□□ -1.03
TRBV27-201ENST00000390399 SMG1Q96Q15 3661 aaKnown RBP8.58□□□□□ -1.04
TRBV27-201ENST00000390399 A0A1B0GX78 115 aa8.58□□□□□ -1.04
TRBV27-201ENST00000390399 B8ZZF3 427 aa8.58□□□□□ -1.04
TRBV27-201ENST00000390399 NRP2O60462 931 aa8.58□□□□□ -1.04
TRBV27-201ENST00000390399 CTSVO60911 334 aa8.58□□□□□ -1.04
TRBV27-201ENST00000390399 SNRNP200O75643 2136 aaKnown RBP8.58□□□□□ -1.04
TRBV27-201ENST00000390399 RFPL1O75677 317 aa8.58□□□□□ -1.04
TRBV27-201ENST00000390399 C8GP07360 202 aa8.58□□□□□ -1.04
TRBV27-201ENST00000390399 CAPN1P07384 714 aa8.58□□□□□ -1.04
TRBV27-201ENST00000390399 FDXRP22570 491 aa8.58□□□□□ -1.04
TRBV27-201ENST00000390399 PMS2P54278 862 aa8.58□□□□□ -1.04
TRBV27-201ENST00000390399 ARSFP54793 590 aa8.58□□□□□ -1.04
TRBV27-201ENST00000390399 VSX2P58304 361 aaPredicted RBP8.58□□□□□ -1.04
TRBV27-201ENST00000390399 YBX1P67809 324 aaKnown RBP8.58□□□□□ -1.04
TRBV27-201ENST00000390399 DCDP81605 110 aaKnown RBP8.58□□□□□ -1.04
TRBV27-201ENST00000390399 NFKB2Q00653 900 aa8.58□□□□□ -1.04
TRBV27-201ENST00000390399 CKAP4Q07065 602 aaKnown RBP8.58□□□□□ -1.04
TRBV27-201ENST00000390399 SP140Q13342 867 aa8.58□□□□□ -1.04
TRBV27-201ENST00000390399 GRM7Q14831 915 aa8.58□□□□□ -1.04
TRBV27-201ENST00000390399 SLC9A5Q14940 896 aa8.58□□□□□ -1.04
TRBV27-201ENST00000390399 THEMIS2Q5TEJ8 643 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms