RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 ARHGAP15Q53QZ3 475 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 FAM219BQ5XKK7 198 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 SPESP1Q6UW49 350 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 GPRIN3Q6ZVF9 776 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 SYVN1Q86TM6 617 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 EFHBQ8N7U6 833 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 KIAA1958Q8N8K9 716 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 ARL10Q8N8L6 244 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 MCOLN3Q8TDD5 553 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 SMIM14Q96QK8 99 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 ZNF382Q96SR6 550 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 SMG9Q9H0W8 520 aaKnown RBP8.72□□□□□ -1.01
GPNMB-202ENST00000381990 MMP27Q9H306 513 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 ABCB8Q9NUT2 735 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 ADGRE2Q9UHX3 823 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 PCTPQ9UKL6 214 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 PDE4DIPQ5VU43 2346 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 MYO7AQ13402 2215 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 A0A1B0GTL3 188 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 LINC01553A4QN01 128 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 STX7O15400 261 aaKnown RBP8.72□□□□□ -1.01
GPNMB-202ENST00000381990 SMAD6O43541 496 aaKnown RBP8.72□□□□□ -1.01
GPNMB-202ENST00000381990 NOBOXO60393 691 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 ECI2O75521 394 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 HOXA9P31269 272 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 ATAD3BQ5T9A4 648 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 ARMC12Q5T9G4 340 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 PRR23CQ6ZRP0 262 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 MMAAQ8IVH4 418 aaKnown RBP8.72□□□□□ -1.01
GPNMB-202ENST00000381990 NKAPQ8N5F7 415 aaKnown RBP8.72□□□□□ -1.01
GPNMB-202ENST00000381990 ZNF548Q8NEK5 533 aaPredicted RBP8.72□□□□□ -1.01
GPNMB-202ENST00000381990 FIG4Q92562 907 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 TBC1D20Q96BZ9 403 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 TCEAL4Q96EI5 215 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 MYO19Q96H55 970 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 C17orf80Q9BSJ5 609 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 TM6SF2Q9BZW4 377 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 LIMD1Q9UGP4 676 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 OSGIN1Q9UJX0 560 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 CLEC4EQ9ULY5 219 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 VPS9D1Q9Y2B5 631 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 PMF1-BGLAPU3KQ54 211 aa8.72□□□□□ -1.01
GPNMB-202ENST00000381990 H7C0S8 307 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 MOSPD3O75425 235 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 NDUFS3O75489 264 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 PGLSO95336 258 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 RHOP08100 348 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 CD70P32970 193 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 DCTP40126 519 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 PIGFQ07326 219 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 CLCA4Q14CN2 919 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 TEAD2Q15562 447 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 DSG4Q86SJ6 1040 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 DCP2Q8IU60 420 aaKnown RBP8.71□□□□□ -1.01
GPNMB-202ENST00000381990 PLD3Q8IV08 490 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 OR2T11Q8NH01 316 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 FUBP1Q96AE4 644 aaKnown RBP8.71□□□□□ -1.01
GPNMB-202ENST00000381990 LGALS12Q96DT0 336 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 MTIF3Q9H2K0 278 aaKnown RBP8.71□□□□□ -1.01
GPNMB-202ENST00000381990 KAT8Q9H7Z6 458 aaKnown RBP8.71□□□□□ -1.01
GPNMB-202ENST00000381990 CCL26Q9Y258 94 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 PCDHGA10Q9Y5H3 936 aa8.71□□□□□ -1.01
GPNMB-202ENST00000381990 ELOVL7A1L3X0 281 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 C5orf67F2Z3F1 127 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 DYRK3O43781 588 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 SOCS5O75159 536 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 RECQL5O94762 991 aaPredicted RBP8.71□□□□□ -1.02
GPNMB-202ENST00000381990 IGSF6O95976 241 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 HNRNPA1P09651 372 aaKnown RBP eCLIP8.71□□□□□ -1.02
GPNMB-202ENST00000381990 PRSS56P0CW18 603 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 NRIP1P48552 1158 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 NEK2P51955 445 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 VBP1P61758 197 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 IL5RAQ01344 420 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 BCL2L1Q07817 233 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 SELPLGQ14242 412 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 NPTX1Q15818 432 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 RBBP7Q16576 425 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 CAPN13Q6MZZ7 669 aaPredicted RBP8.71□□□□□ -1.02
GPNMB-202ENST00000381990 ENPP6Q6UWR7 440 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 NANOGNBQ7Z5D8 188 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 LYSMD2Q8IV50 215 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 HOMEZQ8IX15 550 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 C7orf61Q8IZ16 206 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 SLC7A5P1Q8MH63 180 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 GLB1L3Q8NCI6 653 aaPredicted RBP8.71□□□□□ -1.02
GPNMB-202ENST00000381990 DNAJB8Q8NHS0 232 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 LMLNQ96KR4 655 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 BTBD2Q9BX70 525 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 HOXD1Q9GZZ0 328 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 GABARAPL1Q9H0R8 117 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 TDP1Q9NUW8 608 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 EVLQ9UI08 416 aaPredicted RBP8.71□□□□□ -1.02
GPNMB-202ENST00000381990 FKBPLQ9UIM3 349 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 ZNF225Q9UK10 706 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 POU2F3Q9UKI9 436 aa8.71□□□□□ -1.02
GPNMB-202ENST00000381990 UBA6A0AVT1 1052 aaPredicted RBP8.7□□□□□ -1.02
GPNMB-202ENST00000381990 PRMT5O14744 637 aaPredicted RBP8.7□□□□□ -1.02
GPNMB-202ENST00000381990 SNPHO15079 494 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms