RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 TBC1D3Q8IZP1 549 aaPredicted RBP19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 OXR1Q8N573 874 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 NEIL2Q969S2 332 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 APIPQ96GX9 242 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 PHPT1Q9NRX4 125 aaPredicted RBP19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 DLGAP4Q9Y2H0 992 aa19.24■□□□□ 0.67
PDLIM5-205ENST00000380180 NPIPB8E9PQR5 432 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 H0YIV9 168 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 KMOO15229 486 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 DNAJA2O60884 412 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 FUCA1P04066 466 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 NPPBP16860 134 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 POU3F3P20264 500 aaPredicted RBP19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 MAT2AP31153 395 aaKnown RBP19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 TAP2Q03519 686 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 TSTA3Q13630 321 aaPredicted RBP19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 TAF11Q15544 211 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 KIAA2013Q8IYS2 634 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 DPP10Q8N608 796 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 KRTCAP2Q8N6L1 136 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 OR5AR1Q8NGP9 310 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 CLHC1Q8NHS4 586 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 TMEM125Q96AQ2 219 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 ANKRD27Q96NW4 1050 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 ZBTB18Q99592 522 aa19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 C8orf33Q9H7E9 229 aaPredicted RBP19.23■□□□□ 0.67
PDLIM5-205ENST00000380180 NPPAP01160 153 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 ZNF33BQ06732 778 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 RABL3Q5HYI8 236 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 NANOGP8Q6NSW7 305 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 LRRC56Q8IYG6 542 aaPredicted RBP19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 DNAJC9Q8WXX5 260 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 TFGQ92734 400 aaPredicted RBP19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 SIPA1Q96FS4 1042 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 MTERF1Q99551 399 aaKnown RBP19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 SGPP1Q9BX95 441 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 NANOGQ9H9S0 305 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 SGK2Q9HBY8 427 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 ITM2CQ9NQX7 267 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 GPRC5BQ9NZH0 403 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 NUP214P35658 2090 aaPredicted RBP19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 GPR89AB7ZAQ6 455 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 RPSAP08865 295 aaKnown RBP19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 GPR89BP0CG08 455 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 MYCLP1P12525 358 aaPredicted RBP19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 AMD1P17707 334 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 PNLIPRP1P54315 467 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 MRPS21P82921 87 aaKnown RBP19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 FAM174BQ3ZCQ3 159 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 ZFP1Q6P2D0 407 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 DLEU7Q6UYE1 221 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 SLCO4C1Q6ZQN7 724 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 CHST15Q7LFX5 561 aaPredicted RBP19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 HORMAD1Q86X24 394 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 GLB1L3Q8NCI6 653 aaPredicted RBP19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 RAD51AP1Q96B01 352 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 ZNF570Q96NI8 536 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 CLMPQ9H6B4 373 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 SCML1Q9UN30 329 aa19.22■□□□□ 0.67
PDLIM5-205ENST00000380180 PRPS2P11908 318 aa19.21■□□□□ 0.67
PDLIM5-205ENST00000380180 HSD17B1P14061 328 aa19.21■□□□□ 0.67
PDLIM5-205ENST00000380180 CSTF3Q12996 717 aaKnown RBP19.21■□□□□ 0.67
PDLIM5-205ENST00000380180 DDX39BQ13838 428 aaKnown RBP19.21■□□□□ 0.67
PDLIM5-205ENST00000380180 E2F2Q14209 437 aa19.21■□□□□ 0.67
PDLIM5-205ENST00000380180 CYP2R1Q6VVX0 501 aa19.21■□□□□ 0.67
PDLIM5-205ENST00000380180 FAM124AQ86V42 546 aa19.21■□□□□ 0.67
PDLIM5-205ENST00000380180 GALNT13Q8IUC8 556 aa19.21■□□□□ 0.67
PDLIM5-205ENST00000380180 PRO3102Q9H379 93 aa19.21■□□□□ 0.67
PDLIM5-205ENST00000380180 FZD3Q9NPG1 666 aa19.21■□□□□ 0.67
PDLIM5-205ENST00000380180 PLAGL1Q9UM63 463 aa19.21■□□□□ 0.67
PDLIM5-205ENST00000380180 SH2B3Q9UQQ2 575 aa19.21■□□□□ 0.67
PDLIM5-205ENST00000380180 TMED5Q9Y3A6 229 aa19.21■□□□□ 0.67
PDLIM5-205ENST00000380180 CFAP20Q9Y6A4 193 aaKnown RBP19.21■□□□□ 0.67
PDLIM5-205ENST00000380180 TACR1P25103 407 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 RPL10P27635 214 aaKnown RBP19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 IGFALSP35858 605 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 CLDN8P56748 225 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 SPANXN4Q5MJ08 99 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 CATSPEREQ5SY80 951 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 TMPRSS11BQ86T26 416 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 DHFR2Q86XF0 187 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 RSRC1Q96IZ7 334 aaKnown RBP19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 APOLD1Q96LR9 279 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 TMEM74Q96NL1 305 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 IL17FQ96PD4 163 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 PREBQ9HCU5 417 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 SPATA6Q9NWH7 488 aaPredicted RBP19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 VPS29Q9UBQ0 182 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 TDRKHQ9Y2W6 561 aaKnown RBP19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 PCDHGA11Q9Y5H2 935 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 SLC31A1O15431 190 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 IL6P05231 212 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 SDC1P18827 310 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 PLIN5Q00G26 463 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 ADNP2Q6IQ32 1131 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 HID1Q8IV36 788 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 DCUN1D3Q8IWE4 304 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 KBTBD2Q8IY47 623 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 OR7G3Q8NG95 312 aa19.2■□□□□ 0.66
PDLIM5-205ENST00000380180 RPLP0P6Q8NHW5 317 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms