RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 HTATIP2Q9BUP3 242 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 C1QTNF3Q9BXJ4 246 aa12.58□□□□□ -0.4
USP11-204ENST00000377107 KIAA1522Q9P206 1035 aaPredicted RBP12.58□□□□□ -0.4
USP11-204ENST00000377107 GON4LQ3T8J9 2241 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 MGAT4DA6NG13 374 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 NUDT7P0C024 238 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 EPHA2P29317 976 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 SOAT1P35610 550 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 MEF2AQ02078 507 aaPredicted RBP12.57□□□□□ -0.4
USP11-204ENST00000377107 LRRC74AQ0VAA2 488 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 ILF2Q12905 390 aaKnown RBP12.57□□□□□ -0.4
USP11-204ENST00000377107 TRIM16LQ309B1 348 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 USP39Q53GS9 565 aaKnown RBP12.57□□□□□ -0.4
USP11-204ENST00000377107 RUNDC3AQ59EK9 446 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 IER5LQ5T953 404 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 EGFLAMQ63HQ2 1017 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 NEK5Q6P3R8 708 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 SLCO6A1Q86UG4 719 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 CHDHQ8NE62 594 aaPredicted RBP12.57□□□□□ -0.4
USP11-204ENST00000377107 ACDQ96AP0 544 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 PYURFQ96I23 114 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 WRAP53Q9BUR4 548 aaKnown RBP12.57□□□□□ -0.4
USP11-204ENST00000377107 EPS8L2Q9H6S3 715 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 ZDHHC3Q9NYG2 299 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 DAPK2Q9UIK4 370 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 TESMINQ9Y4I5 508 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 ARNTLO00327 626 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 TEX28O15482 410 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 CYP2A7P20853 494 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 LHCGRP22888 699 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 POU1F1P28069 291 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 ETV3P41162 512 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 OR1E2P47887 323 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 SPCS2Q15005 226 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 TMEM236Q5W0B7 351 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 CEP68Q76N32 757 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 TMEM25Q86YD3 366 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 LEMD2Q8NC56 503 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 TBC1D15Q8TC07 691 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 KAT8Q9H7Z6 458 aaKnown RBP12.57□□□□□ -0.4
USP11-204ENST00000377107 DNAJC11Q9NVH1 559 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 VNN3Q9NY84 501 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 INTS6Q9UL03 887 aaKnown RBP12.57□□□□□ -0.4
USP11-204ENST00000377107 PPT2Q9UMR5 302 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 CORINQ9Y5Q5 1042 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 AREL1O15033 823 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 NADKO95544 446 aaPredicted RBP12.57□□□□□ -0.4
USP11-204ENST00000377107 ACRP10323 421 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 BDKRB1P46663 353 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 NUDT6P53370 316 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 FRG2Q64ET8 278 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 NOXRED1Q6NXP6 359 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 OR4K1Q8NGD4 311 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 OR5K1Q8NHB7 308 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 BORCS5Q969J3 196 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 ISG20Q96AZ6 181 aaKnown RBP12.57□□□□□ -0.4
USP11-204ENST00000377107 FRG2BQ96QU4 278 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 YME1L1Q96TA2 773 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 OSBPL10Q9BXB5 764 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 ZDHHC4Q9NPG8 344 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 KRT84Q9NSB2 600 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 HCFC1R1Q9NWW0 138 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 TRNAU1APQ9NX07 287 aaKnown RBP12.57□□□□□ -0.4
USP11-204ENST00000377107 SCN3BQ9NY72 215 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 CCL26Q9Y258 94 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 TRIM17Q9Y577 477 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 VWA8A3KMH1 1905 aa12.57□□□□□ -0.4
USP11-204ENST00000377107 TMEM202A6NGA9 273 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 H0YAE9 185 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 H7C0S8 307 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 FZD6O60353 706 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 MYO1DO94832 1006 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 NPPAP01160 153 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 SRCP12931 536 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 CBX2Q14781 532 aaPredicted RBP12.56□□□□□ -0.4
USP11-204ENST00000377107 NPTX1Q15818 432 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 CCSMST1Q4G0I0 132 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 CARD16Q5EG05 197 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 ELMSAN1Q6PJG2 1045 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 TPRG1Q6ZUI0 275 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 P3H2Q8IVL5 708 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 GOLM1Q8NBJ4 401 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 OR5AK3PQ8NH89 298 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 TMEM159Q96B96 161 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 RNF208Q9H0X6 261 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 CLMPQ9H6B4 373 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 DOCK6Q96HP0 2047 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 NLRC5Q86WI3 1866 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 H0Y858 1186 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 SLC1A7O00341 560 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 KPNA3O00505 521 aaPredicted RBP12.56□□□□□ -0.4
USP11-204ENST00000377107 NDUFS2O75306 463 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 ALDH1A1P00352 501 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 IGHA2P01877 340 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 CLK1P49759 484 aaKnown RBP12.56□□□□□ -0.4
USP11-204ENST00000377107 LHX8Q68G74 356 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 GAREM2Q75VX8 874 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 TMPRSS11BQ86T26 416 aa12.56□□□□□ -0.4
USP11-204ENST00000377107 DCP2Q8IU60 420 aaKnown RBP12.56□□□□□ -0.4
USP11-204ENST00000377107 EGFL6Q8IUX8 553 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms