RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 EIF1ADQ8N9N8 165 aaKnown RBP11.75□□□□□ -0.53
LSM2-208ENST00000375661 SLC38A9Q8NBW4 561 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 LKAAEAR1Q8TD35 194 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 SNRNP40Q96DI7 357 aaKnown RBP11.75□□□□□ -0.53
LSM2-208ENST00000375661 CLIP3Q96DZ5 547 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 TCTN2Q96GX1 697 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 BIRC8Q96P09 236 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 DHRS4Q9BTZ2 278 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 MFRPQ9BY79 579 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 TSPYL1Q9H0U9 437 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 CDC42EP4Q9H3Q1 356 aaKnown RBP11.75□□□□□ -0.53
LSM2-208ENST00000375661 KIR3DX1Q9H7L2 352 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 PPANQ9NQ55 473 aaKnown RBP11.75□□□□□ -0.53
LSM2-208ENST00000375661 C1GALT1Q9NS00 363 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 IMP3Q9NV31 184 aaKnown RBP11.75□□□□□ -0.53
LSM2-208ENST00000375661 INTS10Q9NVR2 710 aaKnown RBP11.75□□□□□ -0.53
LSM2-208ENST00000375661 SOHLH2Q9NX45 425 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 LUZP4Q9P127 313 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 SLC24A2Q9UI40 661 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 ACSL5Q9ULC5 683 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 PADI2Q9Y2J8 665 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 CRYL1Q9Y2S2 319 aa11.75□□□□□ -0.53
LSM2-208ENST00000375661 CCDC88CQ9P219 2028 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 C17orf113A0A1B0GUU1 675 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 MGAT4DA6NG13 374 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 FAM159BA6NKW6 160 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 IQCF5A8MTL0 148 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 CXorf49A8MYA2 514 aaPredicted RBP11.74□□□□□ -0.53
LSM2-208ENST00000375661 PIAS1O75925 651 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 IPO13O94829 963 aaKnown RBP11.74□□□□□ -0.53
LSM2-208ENST00000375661 IGHEP01854 428 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 AHSGP02765 367 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 CAPN1P07384 714 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 HBQ1P09105 142 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 OR56A5P0C7T3 313 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 COL8A1P27658 744 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 NDUFS1P28331 727 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 PBLDP30039 288 aaPredicted RBP11.74□□□□□ -0.53
LSM2-208ENST00000375661 FMO4P31512 558 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 KPNA2P52292 529 aaKnown RBP11.74□□□□□ -0.53
LSM2-208ENST00000375661 ADARP55265 1226 aaKnown RBP11.74□□□□□ -0.53
LSM2-208ENST00000375661 VSNL1P62760 191 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 MGAT5Q09328 741 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 PRKAA1Q13131 559 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 ELOAQ14241 798 aaKnown RBP11.74□□□□□ -0.53
LSM2-208ENST00000375661 NFE2L1Q14494 772 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 NCF4Q15080 339 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 RNF187Q5TA31 235 aaPredicted RBP11.74□□□□□ -0.53
LSM2-208ENST00000375661 ZNF549Q6P9A3 640 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 CNSTQ6PJW8 725 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 FAM198BQ6UWH4 519 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 IGFL3Q6UXB1 125 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 CEP128Q6ZU80 1094 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 LRRC6Q86X45 466 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 OR2L2Q8NH16 312 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 FER1L6-AS2Q96M78 137 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 C17orf62Q9BQA9 187 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 CCM2Q9BSQ5 444 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 TXLNGYQ9BZA5 131 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 PSMD13Q9UNM6 376 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 B3GNT3Q9Y2A9 372 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 COLEC10Q9Y6Z7 277 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 SEC16AO15027 2179 aa11.74□□□□□ -0.53
LSM2-208ENST00000375661 FER1L5A0AVI2 2057 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 OR6C74A6NCV1 312 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 ANKUB1A6NFN9 424 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 C9J4A7 227 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 QSOX1O00391 747 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 PFDN6O15212 129 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 MAP3K7O43318 606 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 ALPPP05187 535 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 PKMP14618 531 aaKnown RBP11.73□□□□□ -0.53
LSM2-208ENST00000375661 CCR7P32248 378 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 EIF3BP55884 814 aaKnown RBP11.73□□□□□ -0.53
LSM2-208ENST00000375661 ABRQ12979 859 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 NAA30Q147X3 362 aaPredicted RBP11.73□□□□□ -0.53
LSM2-208ENST00000375661 SLMAPQ14BN4 828 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 PLEKHN1Q494U1 663 aaPredicted RBP11.73□□□□□ -0.53
LSM2-208ENST00000375661 LCN10Q6JVE6 187 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 ZNF449Q6P9G9 518 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 NAPRTQ6XQN6 538 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 KIAA0408Q6ZU52 694 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 GALNT7Q86SF2 657 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 SPNS2Q8IVW8 549 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 SYTL1Q8IYJ3 562 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 CFAP206Q8IYR0 622 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 KRT222Q8N1A0 295 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 FBF1Q8TES7 1133 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 PCSK5Q92824 1860 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 C19orf60Q96EN9 201 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 C12orf66Q96MD2 445 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 INSM2Q96T92 566 aaPredicted RBP11.73□□□□□ -0.53
LSM2-208ENST00000375661 BARD1Q99728 777 aaKnown RBP11.73□□□□□ -0.53
LSM2-208ENST00000375661 FUT8Q9BYC5 575 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 COG4Q9H9E3 785 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 ACTR5Q9H9F9 607 aaPredicted RBP11.73□□□□□ -0.53
LSM2-208ENST00000375661 VPS37BQ9H9H4 285 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 IGSF5Q9NSI5 407 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 PCMTD2Q9NV79 361 aa11.73□□□□□ -0.53
LSM2-208ENST00000375661 ASF1BQ9NVP2 202 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms