RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 POPDC3Q9HBV1 291 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 SCML2Q9UQR0 700 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 DHRS7Q9Y394 339 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 NFKBIEO00221 500 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 MANBAO00462 879 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 SEPT4O43236 478 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 XPNPEP2O43895 674 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 PENKP01210 267 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-203ENST00000375274 EBLN1P0CF75 366 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 HTR1BP28222 390 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 FAUP35544 74 aaKnown RBP11.27□□□□□ -0.61
PTCH1-203ENST00000375274 PRR5P85299 388 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 DNASE1L3Q13609 305 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 PTCHD3Q3KNS1 767 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 UNC50Q53HI1 259 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 C14orf80Q86SX3 495 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 SLC2A13Q96QE2 648 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 ZNF382Q96SR6 550 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 EFCAB11Q9BUY7 163 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 TTLL2Q9BWV7 592 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 ADAMTS10Q9H324 1103 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 MARCH7Q9H992 704 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 KCNK13Q9HB14 408 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 PHPT1Q9NRX4 125 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-203ENST00000375274 ZCCHC3Q9NUD5 404 aaKnown RBP11.27□□□□□ -0.61
PTCH1-203ENST00000375274 WDR37Q9Y2I8 494 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 TMED5Q9Y3A6 229 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 ST14Q9Y5Y6 855 aa11.27□□□□□ -0.61
PTCH1-203ENST00000375274 NUP188Q5SRE5 1749 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 FAM172BPA6NC97 362 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 OR1F1O43749 312 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 HCN1O60741 890 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 BEST1O76090 585 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 RASAL1O95294 804 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 PRNPP04156 253 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 RFC2P35250 354 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 STT3AP46977 705 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 STARP49675 285 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 BCAP31P51572 246 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 VBP1P61758 197 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 DUOXA1Q1HG43 343 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 KIAA1614Q5VZ46 1190 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 TUBA3EQ6PEY2 450 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 FAM180AQ6UWF9 173 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 LRRC70Q7Z2Q7 622 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 MRGPRX2Q96LB1 330 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 COL21A1Q96P44 957 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 TMEM27Q9HBJ8 222 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 PDLIM7Q9NR12 457 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 TMLHEQ9NVH6 421 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 TMEM248Q9NWD8 314 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 SMOXQ9NWM0 555 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 SH3PXD2BA1X283 911 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 NDUFB5O43674 189 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 F2P00734 622 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 AMD1P17707 334 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 HTR1EP28566 365 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 TGFBR2P37173 567 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 PLA2G16P53816 162 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 MS4A2Q01362 244 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 PTGR1Q14914 329 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 NPAS4Q8IUM7 802 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 EGFL6Q8IUX8 553 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 TP53INP2Q8IXH6 220 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 OXR1Q8N573 874 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 KDM1BQ8NB78 822 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 OR10G6Q8NH81 332 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 GEMIN6Q8WXD5 167 aaKnown RBP11.26□□□□□ -0.61
PTCH1-203ENST00000375274 S100A13Q99584 98 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 PTPN18Q99952 460 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 SLC35A5Q9BS91 424 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 SLC22A4Q9H015 551 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 SUV39H2Q9H5I1 410 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 IL1RAPQ9NPH3 570 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.26□□□□□ -0.61
PTCH1-203ENST00000375274 CNOT11Q9UKZ1 510 aaKnown RBP11.26□□□□□ -0.61
PTCH1-203ENST00000375274 GMEB1Q9Y692 573 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 CPSF4LA6NMK7 179 aaKnown RBP11.26□□□□□ -0.61
PTCH1-203ENST00000375274 SAP18O00422 153 aaKnown RBP11.26□□□□□ -0.61
PTCH1-203ENST00000375274 PDPK1O15530 556 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 PRAMEF11O60813 436 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 ADH1CP00326 375 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 TGFB1P01137 390 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 CD1DP15813 335 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 MNDAP41218 407 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 HLCSP50747 726 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 SPRYD7Q5W111 196 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 FAM110BQ8TC76 370 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 KLHL6Q8WZ60 621 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 IMP4Q96G21 291 aaKnown RBP11.26□□□□□ -0.61
PTCH1-203ENST00000375274 HSH2DQ96JZ2 352 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 SLC35G5Q96KT7 338 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 PKP4Q99569 1192 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 DHRS4Q9BTZ2 278 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 CALML5Q9NZT1 146 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 MKLN1Q9UL63 735 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 CDC14AQ9UNH5 594 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 RNF11Q9Y3C5 154 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 PRSS51A0A1B0GVH4 220 aa11.26□□□□□ -0.61
PTCH1-203ENST00000375274 RIIAD1A6NNX1 92 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms