RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 KLC1Q07866 573 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 MFAP5Q13361 173 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 FAM214AQ32MH5 1076 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 WASHC2DQ5SRD0 308 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 FRMPD2BQ6IN97 320 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 ISLR2Q6UXK2 745 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 LINC00696Q6ZRV3 163 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 LDB1Q86U70 411 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-202ENST00000374426 KRT222Q8N1A0 295 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 TTC29Q8NA56 475 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-202ENST00000374426 CATSPER1Q8NEC5 780 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 OR6P1Q8NGX9 317 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 ZUFSPQ96AP4 578 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 CRB3Q9BUF7 120 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 TRIM5Q9C035 493 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 ETNK1Q9HBU6 452 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 IL1RAPL1Q9NZN1 696 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 SLC39A10Q9ULF5 831 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 ENTPD4Q9Y227 616 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 KLK4Q9Y5K2 254 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 PDZD2O15018 2839 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 ADGRG4Q8IZF6 3080 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 CELSR1Q9NYQ6 3014 aa13.18□□□□□ -0.3
CXCL12-202ENST00000374426 HYKKA2RU49 373 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 KRT87PA6NCN2 255 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 TARM1B6A8C7 271 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 HNRNPRO43390 633 aaKnown RBP13.17□□□□□ -0.3
CXCL12-202ENST00000374426 SRPX2O60687 465 aaPredicted RBP13.17□□□□□ -0.3
CXCL12-202ENST00000374426 FKBP9O95302 570 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 GAS8O95995 478 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 HPP00738 406 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 ADRA1DP25100 572 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 SKOR2Q2VWA4 1001 aaPredicted RBP13.17□□□□□ -0.3
CXCL12-202ENST00000374426 CCSMST1Q4G0I0 132 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 FASTKD1Q53R41 847 aaKnown RBP13.17□□□□□ -0.3
CXCL12-202ENST00000374426 RPUSD3Q6P087 351 aaKnown RBP13.17□□□□□ -0.3
CXCL12-202ENST00000374426 MYO7BQ6PIF6 2116 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 FAM180AQ6UWF9 173 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 RAD9BQ6WBX8 426 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 NLRP9Q7RTR0 991 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 PEX26Q7Z412 305 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 PRSS58Q8IYP2 241 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 UBL4BQ8N7F7 174 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 ACRBPQ8NEB7 543 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 STT3BQ8TCJ2 826 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 ATG4AQ8WYN0 398 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 C8orf44Q96CB5 159 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 VPS50Q96JG6 964 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 PANX2Q96RD6 677 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 LMF1Q96S06 567 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 TRIM56Q9BRZ2 755 aaKnown RBP13.17□□□□□ -0.3
CXCL12-202ENST00000374426 TSSK1BQ9BXA7 367 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 ZNF160Q9HCG1 818 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 ZNF304Q9HCX3 659 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 MARCH4Q9P2E8 410 aaPredicted RBP13.17□□□□□ -0.3
CXCL12-202ENST00000374426 AMFRQ9UKV5 643 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 RUVBL2Q9Y230 463 aaKnown RBP13.17□□□□□ -0.3
CXCL12-202ENST00000374426 NFS1Q9Y697 457 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 CCDC168Q8NDH2 2452 aa13.17□□□□□ -0.3
CXCL12-202ENST00000374426 LOC105369274A0A096LPK9 316 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 LOC102723532A0A0G2JNH3 316 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 ARHGAP10A1A4S6 786 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 PRMT5O14744 637 aaPredicted RBP13.16□□□□□ -0.3
CXCL12-202ENST00000374426 IPO7O95373 1038 aaKnown RBP13.16□□□□□ -0.3
CXCL12-202ENST00000374426 C1orf105O95561 183 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 ZGLP1P0C6A0 271 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 ACPPP15309 386 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 PPARGP37231 505 aaPredicted RBP13.16□□□□□ -0.3
CXCL12-202ENST00000374426 CARSP49589 748 aaKnown RBP13.16□□□□□ -0.3
CXCL12-202ENST00000374426 PRAMEP78395 509 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 TMED2Q15363 201 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 ATG9BQ674R7 924 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 ZNF324BQ6AW86 544 aaPredicted RBP13.16□□□□□ -0.3
CXCL12-202ENST00000374426 PPP1R21Q6ZMI0 780 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 FJX1Q86VR8 437 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 OR4N4Q8N0Y3 316 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 BCORP1Q8N888 145 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 OR2L3Q8NG85 312 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 OR1N1Q8NGS0 311 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 HMGCLL1Q8TB92 370 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 PSMF1Q92530 271 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 RAD51AP1Q96B01 352 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 MIEF2Q96C03 454 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 MIPEPQ99797 713 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 RAB11FIP5Q9BXF6 653 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 OLAHQ9NV23 265 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 STOX2Q9P2F5 926 aaPredicted RBP13.16□□□□□ -0.3
CXCL12-202ENST00000374426 ZNF282Q9UDV7 671 aaPredicted RBP13.16□□□□□ -0.3
CXCL12-202ENST00000374426 ZC3H7BQ9UGR2 993 aaKnown RBP13.16□□□□□ -0.3
CXCL12-202ENST00000374426 C3orf18Q9UK00 162 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 TTC7AQ9ULT0 858 aaPredicted RBP13.16□□□□□ -0.3
CXCL12-202ENST00000374426 TCAF1Q9Y4C2 921 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 FAM169AQ9Y6X4 670 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 PKDREJQ9NTG1 2253 aa13.16□□□□□ -0.3
CXCL12-202ENST00000374426 F8P00451 2351 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 PCNX1Q96RV3 2341 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 IGLV3-12A0A075B6K2 115 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 A0A0J9YVX5 310 aa13.15□□□□□ -0.3
CXCL12-202ENST00000374426 A0A1W2PPV9 198 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms